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Citing CMDGA
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Annotation type
3
binding sites
2
accessible chromatin
2
gene expression
2
histone modifications
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
DNase-seq
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
16
fibroblast
10
pericyte cell
5
adipocyte
5
chondrocyte
4
pancreatic stellate cell
2
adipose tissue
2
extracellular matrix secreting cell
2
fibroblast of cardiac tissue
2
mesangial cell
2
mesenchymal stem cell
2
osteoblast
2
subcutaneous adipose tissue
1
SGBS preadipocytes
1
hepatic stellate cell
1
luteal cell
1
omental fat pad
1
preadipocyte
1
skin fibroblast
1
stromal cell
Organ
2
connective tissue
0
blood
Life stage
1
adult
1
unknown
Date released
1
February, 2021
1
November, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
pQTL
annotation_type_category!
DNase-seq
Showing 2 of 2 results
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Download
FileSet
DSR010PUE
released
Annotation file set
: Accessible chromatin of E-MTAB-6834 - ATAC-seq of primary mesenchymal stem cell (MSC)-derived osteoblasts (differentiated with BMP2) from 4 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383TPO
released
Annotation file set
: GSE120755 accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP