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Schema
Citing CMDGA
Clear Filters
Annotation type
6
binding sites
4
accessible chromatin
4
gene expression
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
20
pigmented layer of retina
8
EndoC_BH1
8
retinal pigment epithelial cell
7
hepatocyte
6
endothelial cell
6
pancreatic beta cell
6
pancreatic ductal cell
5
pancreatic alpha cell
4
endothelial cell of hepatic sinusoid
4
pancreatic acinar cell
4
pancreatic delta cell
3
glomerular visceral epithelial cell
2
aortic endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
pancreatic polypeptide-secreting cell
2
renal cortical epithelial cell
1
brain microvascular endothelial cell
1
breast epithelium
1
bronchial epithelial cell
1
club cell
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of lymphatic vessel
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
esophagus squamous epithelium
1
foreskin keratinocyte
1
glomerular epithelium
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
mammary epithelial cell
1
mammary gland epithelial cell
1
neuroendocrine cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pulmonary artery endothelial cell
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
tracheal epithelial cell
1
type B pancreatic cell
1
type I pneumocyte
1
type II pneumocyte
1
urothelial cell
0
B cell
Organ
4
blood vessel
4
epithelium
4
liver
4
vasculature
Life stage
4
adult
Date released
4
February, 2024
Software used
4
macs
Lab
4
Ines Cebola, Imperial College London
Project
4
AMP
RFA
4
AMP2
ENCODE3
annotation_type!
representative DNase hypersensitivity sites
award.rfa!
ENCODE3
Showing 4 of 4 results
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FileSet
DSR573JPW
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR467GJM
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR269PNK
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR195UVD
released
Annotation file set
: Accessible chromatin of liver sinusoidal endothelial cells cultured with basal medium.
Lab:
Ines Cebola, Imperial College London
Project:
AMP