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Schema
Citing CMDGA
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Annotation type
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
14
fibroblast
10
pericyte cell
4
pancreatic stellate cell
3
cardiac fibroblast
3
osteoblast
2
adipocyte
2
extracellular matrix secreting cell
2
fibroblast of cardiac tissue
2
hepatic stellate cell
2
megakaryocyte
2
mesangial cell
2
omental fat pad
2
subcutaneous adipose tissue
1
SGBS preadipocytes
1
adipose tissue
1
brain pericyte
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
luteal cell
1
mesenchymal stem cell
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin fibroblast
1
stromal cell
Organ
3
connective tissue
0
bone element
Life stage
2
unknown
1
adult
Date released
2
November, 2020
1
February, 2021
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
target gene predictions
Showing 3 of 3 results
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Download
FileSet
DSR906VQP
released
Annotation file set
: GSE120755 DNase-seq accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010PUE
released
Annotation file set
: Accessible chromatin of E-MTAB-6834 - ATAC-seq of primary mesenchymal stem cell (MSC)-derived osteoblasts (differentiated with BMP2) from 4 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383TPO
released
Annotation file set
: GSE120755 accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP