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Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
10
chromatin state
10
target gene predictions
1
accessible chromatin
1
binding sites
1
histone modifications
0
gene expression
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
tsv
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
24
retina
20
pigmented layer of retina
19
endothelial cell
19
monocyte
18
fibroblast
14
macrophage
14
neural progenitor cell
13
excitatory neuron
13
hepatocyte
12
endothelial cell of hepatic sinusoid
11
islet of Langerhans
11
kidney
11
pancreatic ductal cell
11
retinal pigment epithelial cell
10
pericyte cell
10
smooth muscle cell
9
EndoC_BH1
9
breast cancer cell
9
embryonic stem cell
9
pancreatic beta cell
8
B cell
8
adipocyte
8
astrocyte
8
osteoblast
8
pancreatic acinar cell
8
pancreatic alpha cell
7
T cell
7
erythroblast
7
fibroblast cell line
7
melanoma
7
skeletal muscle fiber
7
skeletal muscle satellite cell
6
SGBS preadipocytes
6
chondrocyte
6
glutamatergic neuron
6
heart
6
keratinocyte
6
pancreas
6
pancreatic delta cell
6
regulatory T cell
5
CD8-positive, alpha-beta T cell
5
HepG2
5
cardiac muscle cell
5
fibroblast of cardiac tissue
5
foreskin fibroblast
5
inhibitory neuron
5
liver
5
mammary epithelial cell
5
mesenchymal stem cell
5
pancreatic stellate cell
5
prostate cancer cell line
5
skeletal muscle myoblast
4
MCF-7
4
Rh-4 cell
4
acute myeloid leukemia
4
choroid plexus epithelial cell
4
dermal fibroblast
4
endothelial cell of umbilical vein
4
glial cell
4
glioblastoma multiforme cancer stem cell
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
mammary gland epithelial cell
4
memory B cell
4
natural killer cell
4
neuroblastoma cell
4
neuronal stem cell
4
skin fibroblast
4
spinal cord
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
3
cardiac fibroblast
3
A549
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
Caco-2 cell
3
ECC-1
3
GM06990
3
GM12864
3
GM12865
3
GM12878
3
GM19240
3
H1-hESC
3
HAC cell
3
HBMEC cell
3
HCT-116 cell
3
HEK293
3
HL-60
3
IMR-90
3
Jurkat
3
K562
3
NHEK
3
NT2-D1 cell
3
Normal Human Astrocytes
3
PANC-1 cell
3
RS4-11 cell
3
SAEC
3
SK-N-MC
3
SK-N-SH_RA
3
T-47D cell
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
Th1 cell
3
Tumor-derived cell line
3
U-87 MG
3
U2OS
3
WERI-Rb-1
3
WI-38 cell
3
adipose tissue
3
adipose-derived stem cell
3
aortic adventitial fibroblast
3
aortic endothelial cell
3
brain
3
bronchial epithelial cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
diffuse intrinsic pontine glioma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of proximal tubule
3
erythroid cell
3
esophageal epithelial cell
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
gabaergic neuron
3
glomerular endothelial cell
3
heart left ventricle
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
leukocyte
3
liposarcoma
3
lung fibroblast cell line
3
lymphoblastoid cell line
3
mesangial cell
3
midbrain
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic polypeptide-secreting cell
3
plasma cell
3
primordial germ cell
3
prostate gland
3
renal cortical epithelial cell
3
renal epithelial cell
3
right atrium auricular region
3
smooth muscle cell of the coronary artery
3
spleen
3
stomach
3
synovial sarcoma cell
3
tibial artery
3
tibial nerve
3
tracheal epithelial cell
3
triple-negative breast cancer
3
type I pneumocyte
2
786-O cell
2
A-673 cell
2
Ammon's horn
2
B-lymphocyte
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
COLO-320 cell
2
COLO-829 cell
2
COLO205
2
D341 Med cell
2
DND-41 cell
2
Daoy
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
G-401 cell
2
GM08714
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12891
2
GM12892
2
GM13976
2
GM13977
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM20000
Date released
1
February, 2021
1
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
tsv
Showing 2 of 2 results
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Download
FileSet
DSR818RAD
released
Annotation file set
: Binding sites annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP