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Schema
Citing CMDGA
Clear Filters
Annotation type
23
target gene predictions
candidate regulatory elements
7
chromatin state
2
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
105
monocyte
35
CD8-positive, alpha-beta T cell
30
neural progenitor cell
25
retina
20
breast cancer cell
20
fibroblast
20
pigmented layer of retina
19
endothelial cell
15
macrophage
13
excitatory neuron
13
hepatocyte
12
endothelial cell of hepatic sinusoid
12
kidney
12
neuroblastoma cell
12
retinal pigment epithelial cell
11
embryonic stem cell
11
gastric cancer cell
10
B cell
10
EndoC_BH1
10
HepG2
10
Rhabdomyosarcoma
10
diffuse intrinsic pontine glioma
10
pancreatic ductal cell
10
pericyte cell
9
astrocyte
9
islet of Langerhans
9
keratinocyte
9
liposarcoma
8
T cell
8
T-cell acute lymphoblastic leukemia
8
adipocyte
8
esophageal adenocarcinoma
8
fibroblast cell line
8
osteoblast
8
pancreatic beta cell
8
smooth muscle cell
7
B-lymphoblastoid cell line
7
acute myeloid leukemia
7
cardiac muscle cell
7
chondrocyte
7
erythroblast
7
fibroblast of cardiac tissue
7
foreskin fibroblast
7
hESC cell
7
heart
7
liver
7
pancreatic acinar cell
6
Chondroid Chordoma
6
MCF-7
6
Rh-4 cell
6
SGBS preadipocytes
6
brain
6
hepatic stellate cell
6
neuroblastoma cell line
6
neuronal stem cell
6
pancreas
5
Ewing sarcoma
5
Jurkat
5
RS4-11 cell
5
Th1 cell
5
bronchial epithelial cell
5
choroid plexus epithelial cell
5
dermal fibroblast
5
diffuse large B-cell lymphoma
5
esophageal squamous cell carcinoma
glioblastoma multiforme cancer stem cell
5
glutamatergic neuron
5
lymphoblastoid cell line
5
mammary epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
regulatory T cell
4
A549
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
BE(2)-C
4
BJ cell
4
COLO205
4
Caco-2 cell
4
GM06990
4
GM12864
4
GM12865
4
GM12878
4
GM19240
4
H1-hESC
4
HAC cell
4
HBMEC cell
4
HCT-116 cell
4
HEK293
4
HL-60
4
HS-SY-2 cell
4
IMR-90
4
K562
4
Mantle cell lymphoma
4
NHEK
4
NT2-D1 cell
4
Normal Human Astrocytes
4
PANC-1 cell
4
SAEC
4
SK-N-MC
4
SK-N-SH_RA
4
T-47D cell
4
Tumor-derived cell line
4
U-87 MG
4
U2OS
4
WERI-Rb-1
4
WI-38 cell
4
acute myeloid leukemia cell
4
adipose-derived stem cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
colon adenocarcinoma
4
endothelial cell of umbilical vein
4
erythroid cell
4
erythroid progenitor cell
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
inhibitory neuron
4
natural killer cell
4
pancreatic alpha cell
4
pancreatic delta cell
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
3
cardiac fibroblast
3
786-O cell
3
A-673 cell
3
CD1c-positive myeloid dendritic cell
3
CD4-positive helper T cell
3
CMK
3
COLO-320 cell
3
D341 Med cell
3
DND-41 cell
3
ECC-1
3
G-401 cell
3
GM10847
3
GM12872
3
GM12873
3
GM12875
3
GM12891
3
GM12892
3
GM18505
3
GM18526
3
GM18951
3
GM19099
3
GM19193
3
GM19238
3
GM19239
3
GM23248
3
HAP-1
3
HEK293-T-REx cell
3
HT-29
3
HeLa cell
3
HuH-7
3
Ishikawa
3
KARPAS-422 cell
3
Kasumi-1
3
LHCN-M2
3
LNCAP
3
LoVo cell
3
MCF10A-Er-Src cell
3
MDA-MB-231 cell
3
MG63
3
MM.1S
3
MOLM-13 cell
3
Myoblasts
3
NAMALWA cell
3
NB-4 cell
3
NCCIT cell
3
NHBE cell
3
NHDF cell
3
OCI-AML3
3
OCI-LY7
3
PA-TU-8988T cell
3
PC-3
3
PC-9
3
REH cell
3
RKO
3
RPMI8226
3
RWPE1
3
Raji cell
3
SH-SY5Y cell
3
SW480
3
Saos-2 cell
3
T-helper 1 cell
3
Th17 cell
3
U-266 cell
3
U937
3
ZR-75-1 cell
3
adipose tissue
Organ
4
blood
4
bodily fluid
Date released
2
February, 2021
1
June, 2020
1
October, 2022
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
candidate regulatory elements
biosample_term_name!
glioblastoma multiforme cancer stem cell
Showing 4 of 4 results
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Download
FileSet
DSR190KUB
released
Annotation file set
: Binding sites annotation for K562 (K562) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855GPE
released
Annotation file set
: Histone modifications annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044RQC
released
Annotation file set
: Binding sites annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP