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Schema
Citing CMDGA
Clear Filters
Annotation type
7
candidate regulatory elements
4
binding sites
2
chromatin state
2
histone modifications
2
target gene predictions
1
accessible chromatin
0
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ChIP-seq
1
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
25
retina
24
fibroblast
20
endothelial cell
20
pigmented layer of retina
17
macrophage
14
neural progenitor cell
13
excitatory neuron
12
endothelial cell of hepatic sinusoid
12
kidney
11
hepatocyte
11
pancreatic ductal cell
11
retinal pigment epithelial cell
11
smooth muscle cell
10
pericyte cell
9
T cell
9
breast cancer cell
9
islet of Langerhans
9
pancreatic beta cell
8
B cell
8
adipocyte
8
astrocyte
8
heart
8
osteoblast
8
pancreatic acinar cell
8
pancreatic alpha cell
7
cardiac muscle cell
7
erythroblast
7
fibroblast cell line
7
keratinocyte
7
melanoma
7
pancreas
7
skeletal muscle fiber
6
SGBS preadipocytes
6
chondrocyte
6
enterocyte
6
glutamatergic neuron
6
monocyte
6
pancreatic delta cell
6
regulatory T cell
5
cardiac fibroblast
5
CD8-positive, alpha-beta T cell
5
HepG2
5
choroid plexus epithelial cell
5
coronary artery
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
foreskin fibroblast
5
heart left ventricle
5
hepatic stellate cell
5
inhibitory neuron
5
liver
5
mammary epithelial cell
5
mammary gland epithelial cell
5
myofibroblast cell
5
prostate cancer cell line
5
right atrium auricular region
5
skeletal muscle myoblast
5
skeletal muscle satellite cell
5
tibial artery
5
tibial nerve
5
type II pneumocyte
4
MCF-7
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
Rh-4 cell
4
acute myeloid leukemia
4
adipose tissue
4
basal cell
4
brain
4
cortical cell of adrenal gland
4
dermal fibroblast
4
embryonic stem cell
4
glioblastoma multiforme cancer stem cell
4
glomerular visceral epithelial cell
4
memory B cell
4
mesenchymal stem cell
4
midbrain
4
natural killer cell
4
neuroblastoma cell
4
neuronal stem cell
4
pancreatic stellate cell
4
skin fibroblast
4
spinal cord
3
A549
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
Caco-2 cell
3
ECC-1
3
EndoC_BH1
3
GM06990
3
GM12864
3
GM12865
3
GM12878
3
GM19240
3
H1-hESC
3
HAC cell
3
HBMEC cell
3
HCT-116 cell
3
HEK293
3
HL-60
3
IMR-90
3
Jurkat
3
K562
3
NHEK
3
NT2-D1 cell
3
Normal Human Astrocytes
3
PANC-1 cell
3
RS4-11 cell
3
SAEC
3
SK-N-MC
3
SK-N-SH_RA
3
Schwann cell
3
T-47D cell
3
T-cell acute lymphoblastic leukemia
3
T-helper 1 cell
3
Th1 cell
3
Tumor-derived cell line
3
U-87 MG
3
U2OS
3
WERI-Rb-1
3
WI-38 cell
3
adipose-derived stem cell
3
aortic adventitial fibroblast
3
aortic endothelial cell
3
brain pericyte
3
bronchial epithelial cell
3
caudate nucleus
3
colon epithelial cell
3
diffuse intrinsic pontine glioma
3
endothelial cell of lymphatic vessel
3
epithelial cell of proximal tubule
3
erythroid cell
3
esophageal epithelial cell
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
frontal cortex
3
gabaergic neuron
3
glial cell
3
globus pallidus
3
glomerular endothelial cell
3
goblet cell
3
kidney glomerular epithelial cell
3
liposarcoma
3
lung fibroblast cell line
3
lymphoblastoid cell line
3
mast cell
3
medulla oblongata
3
mesothelial cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
occipital lobe
3
pancreatic polypeptide-secreting cell
3
plasma cell
3
pons
3
primordial germ cell
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
renal epithelial cell
3
renal pelvis
3
spleen
3
stomach
3
subcutaneous adipose tissue
3
superior temporal gyrus
3
synovial sarcoma cell
3
tracheal epithelial cell
3
triple-negative breast cancer
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
hindlimb muscle
2
muscle of leg
2
786-O cell
2
A-673 cell
2
Ammon's horn
2
B-lymphocyte
2
Burkitt's lymphoma
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
COLO-320 cell
2
COLO-829 cell
2
COLO205
2
D341 Med cell
2
DND-41 cell
2
Daoy
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
G-401 cell
2
GM08714
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
Organ
5
connective tissue
5
penis
5
skin of body
Date released
2
February, 2021
2
October, 2022
1
June, 2020
Software used
3
macs
2
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
May, 2021
Showing 5 of 5 results
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Download
FileSet
DSR050HDC
released
Annotation file set
: Binding sites annotation for foreskin fibroblast (NHDF-neo) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR792ADH
released
Annotation file set
: Binding sites annotation for foreskin fibroblast (HFF) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073IHA
released
Annotation file set
: Binding sites annotation for Epidermis HFF-Myc from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR131VXM
released
Annotation file set
: Binding sites annotation for Epidermis HFF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR124PLH
released
Annotation file set
: Accessible chromatin annotation for Epidermis HFF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP