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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
binding sites
2
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
ChIP-seq
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
cell line
Biosample term
23
retina
20
pigmented layer of retina
18
endothelial cell
17
fibroblast
15
monocyte
14
neural progenitor cell
13
excitatory neuron
12
endothelial cell of hepatic sinusoid
12
macrophage
10
kidney
9
EndoC_BH1
9
breast cancer cell
9
embryonic stem cell
9
pancreatic ductal cell
9
pericyte cell
9
retinal pigment epithelial cell
9
smooth muscle cell
8
astrocyte
8
hepatocyte
8
pancreatic beta cell
7
melanoma
7
pancreatic acinar cell
7
pancreatic alpha cell
6
adipocyte
6
chondrocyte
6
fibroblast cell line
6
glutamatergic neuron
6
keratinocyte
5
SGBS preadipocytes
5
T cell
5
erythroblast
5
inhibitory neuron
5
islet of Langerhans
5
osteoblast
5
pancreatic delta cell
5
prostate cancer cell line
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
cardiac muscle cell
4
glioblastoma multiforme cancer stem cell
4
heart
4
liver
4
neuroblastoma cell
4
pancreas
4
pancreatic stellate cell
3
cardiac fibroblast
3
B cell
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
adipose tissue
3
adipose-derived stem cell
3
aortic endothelial cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
enterocyte
3
fibroblast of cardiac tissue
3
gabaergic neuron
3
glial cell
3
heart left ventricle
3
hepatic stellate cell
3
liposarcoma
3
mammary epithelial cell
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
neuronal stem cell
3
synovial sarcoma cell
3
triple-negative breast cancer
3
type I muscle cell
3
type II muscle cell
3
type II pneumocyte
2
Burkitt's lymphoma
2
CD8-positive, alpha-beta T cell
2
COLO-320 cell
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
HS-SY-2 cell
2
HepG2
2
Jurkat
2
MCF-7
2
Mantle cell lymphoma
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
RS4-11 cell
2
Rh-4 cell
2
SK-MEL-5 cell
2
SUM-185PE cell
2
T-lymphocyte
2
Th1 cell
2
adult acute myeloid leukemia
2
blood vessel smooth muscle cell
2
brain
2
bronchial epithelial cell
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
colon adenocarcinoma
2
differentiating adipose-derived stem cell
2
diffuse large B-cell lymphoma
2
endocardial cell
2
endothelial cell of lymphatic vessel
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid progenitor cell
2
esophageal squamous cell carcinoma
2
fetal cardiomyocyte
2
foreskin fibroblast
2
gastric cancer cell
2
glomerular visceral epithelial cell
2
immortal neural cell line cell
2
leukemic stem cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
mast cell
2
megakaryocyte
2
memory B cell
2
mesangial cell
2
mesothelial cell
2
metastatic melanoma
2
mononuclear cell of bone marrow
2
neuroblastoma cell line
2
neuron
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
omental fat pad
2
osteosarcoma
2
pancreatic cancer cell
2
pancreatic cell line
2
pancreatic polypeptide-secreting cell
2
peripheral blood-derived erythroblast
2
plasma cell
2
preadipocyte
2
primordial germ cell
2
prostate derived cell line
2
prostate gland
2
regulatory T cell
2
right atrium auricular region
2
schwann cell
2
skin fibroblast
2
smooth muscle cell of the coronary artery
2
smooth muscle cell of the esophagus
2
spleen
2
subcutaneous adipose tissue
2
tibial artery
2
tibial nerve
2
tracheal epithelial cell
2
type I pneumocyte
1
hindlimb muscle
1
143B
1
22Rv1
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A2780 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
Adipose stromal cell
1
Ammon's horn
1
AsPC-1 cell
1
B-CPAP cell
1
B-cell acute lymphoblastic leukemia
1
B-cell lymphoma cell
1
B-lymphoblast
1
B-lymphoblastoid cell line
1
B-lymphocyte
1
BCBL-1 cell
1
BE(2)-C
1
BEAS-2B cell
1
BEL-7402 cell
1
BG03
1
BICR 31
1
BJ cell
1
BJAB cell
1
BL-2 cell
1
BL-41 cell
1
BPE cell
1
BT-20 cell
1
BT-474 cell
1
BT-549 cell
1
BeWo cell
1
BxPC-3 cell
1
C666-1 cell
1
CA46 cell
Organ
1
lung
Date released
2
February, 2021
2
February, 2024
June, 2020
Software used
4
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
June, 2020
Showing 4 of 4 results
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Download
FileSet
DSR482VBC
released
Annotation file set
: Accessible chromatin of drastic dynamically reformed during the adipogenesis of hASCs, 24 hour
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR629NXL
released
Annotation file set
: Accessible chromatin of drastic dynamically reformed during the adipogenesis of hASCs, 0 hour
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378GKW
released
Annotation file set
: Binding sites annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR993NEB
released
Annotation file set
: Binding sites annotation for Adipocyte Adipose_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP