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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
31
candidate regulatory elements
19
chromatin state
17
target gene predictions
3
histone modifications
2
binding sites
2
eQTL
1
accessible chromatin
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
cell line
Biosample term
23
retina
20
pigmented layer of retina
18
endothelial cell
18
fibroblast
17
monocyte
14
neural progenitor cell
13
excitatory neuron
13
macrophage
12
endothelial cell of hepatic sinusoid
10
kidney
10
pericyte cell
10
retinal pigment epithelial cell
9
EndoC_BH1
9
breast cancer cell
9
embryonic stem cell
9
pancreatic ductal cell
9
smooth muscle cell
8
astrocyte
8
hepatocyte
8
islet of Langerhans
8
pancreatic beta cell
7
erythroblast
7
melanoma
7
pancreatic acinar cell
7
pancreatic alpha cell
6
B cell
6
T cell
6
adipocyte
6
chondrocyte
6
fibroblast cell line
6
glutamatergic neuron
6
keratinocyte
6
osteoblast
5
SGBS preadipocytes
5
cardiac muscle cell
5
inhibitory neuron
pancreatic delta cell
5
prostate cancer cell line
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
CD8-positive, alpha-beta T cell
4
HepG2
4
foreskin fibroblast
4
glioblastoma multiforme cancer stem cell
4
heart
4
liver
4
mammary epithelial cell
4
memory B cell
4
neuroblastoma cell
4
pancreas
4
pancreatic stellate cell
4
regulatory T cell
4
type II pneumocyte
3
cardiac fibroblast
3
MCF-7
3
T-cell acute lymphoblastic leukemia
3
Tumor-derived cell line
3
acute myeloid leukemia
3
adipose tissue
3
adipose-derived stem cell
3
aortic endothelial cell
3
choroid plexus epithelial cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
dermal fibroblast
3
diffuse intrinsic pontine glioma
3
endothelial cell of lymphatic vessel
3
endothelial cell of umbilical vein
3
enterocyte
3
fibroblast of cardiac tissue
3
gabaergic neuron
3
glial cell
3
heart left ventricle
3
hepatic stellate cell
3
liposarcoma
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
neuronal stem cell
3
plasma cell
3
skeletal muscle myoblast
3
synovial sarcoma cell
3
triple-negative breast cancer
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Burkitt's lymphoma
2
COLO-320 cell
2
Caco-2 cell
2
DND-41 cell
2
ECC-1
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM06990
2
GM08714
2
GM10847
2
GM12801
2
GM12864
2
GM12865
2
GM12872
2
GM12873
2
GM12874
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
H1-hESC
2
HAC cell
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HEK293-T-REx cell
2
HL-60
2
HS-SY-2 cell
2
IMR-90
2
Jurkat
2
K562
2
Mantle cell lymphoma
2
Muller cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
PANC-1 cell
2
PFSK-1 cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
RS4-11 cell
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SK-MEL-5 cell
2
SK-N-MC
2
SK-N-SH_RA
2
SUM-185PE cell
2
T follicular helper cell
2
T-47D cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
T-lymphocyte
2
Th1 cell
2
U-87 MG
2
U2OS
2
WERI-Rb-1
2
WI-38 cell
2
adult acute myeloid leukemia
2
aortic adventitial fibroblast
2
basal cell
2
blood vessel smooth muscle cell
2
brain
2
bronchial epithelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
chronic myeloid leukemia cell
2
ciliated cell
2
club cell
2
colon adenocarcinoma
2
differentiating adipose-derived stem cell
2
diffuse large B-cell lymphoma
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of proximal tubule
2
erythroid progenitor cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of lung
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
gamma-delta T cell
2
gastric cancer cell
2
glioblastoma cell
2
glomerular visceral epithelial cell
Organ
2
brain
1
lymph node
Life stage
1
fetal
Date released
2
February, 2021
June, 2020
1
January, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
pancreatic delta cell
month_released!
June, 2020
Showing 3 of 3 results
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Download
FileSet
DSR133CLX
released
Annotation file set
: Binding sites annotation for Neural Fetal_brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR639MOA
released
Annotation file set
: Binding sites annotation for Blood GM10266 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP