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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
2
cell line
2
primary cell
Biosample term
20
pigmented layer of retina
18
endothelial cell
12
endothelial cell of hepatic sinusoid
11
retinal pigment epithelial cell
10
pancreatic ductal cell
9
hepatocyte
8
EndoC_BH1
8
pancreatic beta cell
7
pancreatic acinar cell
7
pancreatic alpha cell
6
keratinocyte
5
mammary epithelial cell
5
pancreatic delta cell
4
choroid plexus epithelial cell
4
endothelial cell of umbilical vein
4
mammary gland epithelial cell
4
type II pneumocyte
3
aortic endothelial cell
3
bronchial epithelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
glomerular visceral epithelial cell
3
tracheal epithelial cell
3
type I pneumocyte
2
capillary endothelial cell
2
club cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endocardial cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
foreskin keratinocyte
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
luminal epithelial cell of mammary gland
2
mesothelial cell
2
pancreatic polypeptide-secreting cell
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
breast epithelium
1
cardiac endothelial cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
dermis lymphatic vessel endothelial cell
1
eccrine cell
1
endothelial cell of coronary artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
esophagus squamous epithelium
1
foveolar cell of stomach
1
gastric goblet cell
1
glomerular epithelium
1
goblet cell
1
granular cell of epidermis
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney epithelium
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lung neuroendocrine cell
1
meso-epithelial cell
1
myoepithelial cell
1
neuroendocrine cell
1
non keratinizing barrier epithelial cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
placental villus capillary endothelial cell
1
renal connecting tubule
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
respiratory goblet cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type B pancreatic cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
ureteric bud
1
urothelial cell
1
vein endothelial cell
Organ
10
connective tissue
4
brain
4
epithelium
4
vasculature
3
mammary gland
Date released
1
February, 2021
1
January, 2020
1
June, 2020
1
October, 2022
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR600YPJ
released
Annotation file set
: Binding sites annotation for choroid plexus epithelial cell (HCPEpiC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR038LCX
released
Annotation file set
: Binding sites annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR237IBX
released
Annotation file set
: Accessible chromatin annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR536GJU
released
Annotation file set
: Accessible chromatin annotation of brain choroid plexus cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP