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Schema
Citing CMDGA
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Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
eQTL
2
variant allelic effects
1
caQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
ATAC-seq
1
DNase-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
5
heart
4
coronary artery
4
fibroblast of cardiac tissue
3
heart left ventricle
3
right atrium auricular region
2
endocardial cell
2
smooth muscle cell of the coronary artery
1
NT2-D1 cell
1
cardiac endothelial cell
1
fetal heart
1
heart right ventricle
1
left cardiac atrium
1
luteal cell
1
ovary
1
somatic gonadal cell
1
testis
1
ventricular cardiac muscle cell
Organ
4
artery
4
blood vessel
4
heart
4
vasculature
0
gonad
0
pericardium
Life stage
1
adult
Date released
2
February, 2023
1
January, 2020
1
November, 2019
Software used
3
macs
1
rasqual
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860LQT
released
Annotation file set
: Accessible chromatin of coronary artery from ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR543XWY
released
Annotation file set
: Accessible chromatin annotation of coronary artery from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR098JBP
released
Annotation file set
: Accessible chromatin annotation of coronary artery
Lab:
AMP-T2D consortium
Project:
AMP