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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
7
kidney
6
endothelial cell
6
hepatocyte
5
fibroblast
4
endothelial cell of hepatic sinusoid
4
macrophage
4
smooth muscle cell
3
B cell
3
adipocyte
3
endothelial cell of lymphatic vessel
3
mast cell
3
natural killer cell
2
endocardial cell
2
neuronal stem cell
2
pericyte cell
2
regular ventricular cardiac myocyte
2
skeletal muscle fiber
1
T cell
1
cholangiocyte
1
dendritic cell
1
erythrocyte
1
glial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
leukocyte
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mesenchymal stem cell
1
myofibroblast cell
1
neural cell
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Disease term
2
heart failure
Organ
3
connective tissue
Life stage
2
adult
Date released
2
May, 2024
1
February, 2024
Software used
1
macs
Lab
2
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Project
3
AMP
RFA
8
AMP
3
AMP2
1
ENCODE3
Showing 3 of 3 results
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Download
FileSet
DSR095UPL
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of adipocyte derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR542XFW
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of adipocyte derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR083CQX
released
Annotation file set
: Cell type chromatin broad peaks and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP