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Schema
Citing CMDGA
Clear Filters
Annotation type
17
target gene predictions
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
26
retina
25
kidney
24
stomach
23
heart
20
pigmented layer of retina
18
monocyte
18
muscle of arm
17
lung
16
endothelial cell
16
fibroblast
16
large intestine
16
muscle of leg
15
adrenal gland
15
brain
15
muscle of back
15
small intestine
14
B cell
14
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
left lung
13
macrophage
13
placenta
12
CD8-positive, alpha-beta T cell
12
renal cortex interstitium
renal pelvis
12
right lung
11
neural progenitor cell
11
right kidney
11
spleen
10
hematopoietic multipotent progenitor cell
10
liver
10
pericyte cell
10
retinal pigment epithelial cell
10
smooth muscle cell
10
thymus
9
CD4-positive, alpha-beta T cell
9
astrocyte
9
heart left ventricle
9
hepatocyte
9
left kidney
9
spinal cord
8
EndoC_BH1
8
adipocyte
8
foreskin keratinocyte
8
pancreas
8
pancreatic ductal cell
7
T cell
7
cardiac muscle cell
7
natural killer cell
7
pancreatic acinar cell
7
pancreatic beta cell
7
regulatory T cell
6
H9
6
SGBS preadipocytes
6
T-helper 1 cell
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
foreskin fibroblast
6
glutamatergic neuron
6
islet of Langerhans
6
osteoblast
6
pancreatic alpha cell
6
sigmoid colon
6
skeletal muscle satellite cell
6
tibial nerve
5
CD4-positive, alpha-beta memory T cell
5
MCF-7
5
Peyer's patch
5
chondrocyte
5
erythroblast
5
esophagus squamous epithelium
5
gastrocnemius medialis
5
inhibitory neuron
5
left renal cortex interstitium
5
left renal pelvis
5
mesenchymal stem cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
omental fat pad
5
ovary
5
right renal pelvis
5
skeletal muscle fiber
5
subcutaneous abdominal adipose tissue
5
testis
5
thyroid gland
5
transverse colon
5
trophoblast cell
5
upper lobe of left lung
4
A549
4
CD14-positive monocyte
4
T-cell
4
T-helper 17 cell
4
T-helper 2 cell
4
WI38
4
body of pancreas
4
breast epithelium
4
caudate nucleus
4
chorionic villus
4
coronary artery
4
dermis blood vessel endothelial cell
4
esophagus muscularis mucosa
4
fibroblast of cardiac tissue
4
foreskin melanocyte
4
gastroesophageal sphincter
4
glomerular visceral epithelial cell
4
heart right ventricle
4
lower leg skin
4
mammary epithelial cell
4
memory B cell
4
muscle of trunk
4
neurosphere
4
pancreatic delta cell
4
pancreatic stellate cell
4
peripheral blood mononuclear cell
4
psoas muscle
4
right atrium auricular region
4
right renal cortex interstitium
4
skeletal muscle myoblast
4
subcutaneous adipose tissue
4
tibial artery
4
type II pneumocyte
3
cardiac fibroblast
3
Ammon's horn
3
HEK293
3
HepG2
3
LNCAP
3
MCF 10A
3
SK-N-DZ
3
adipose tissue
3
ascending aorta
3
brain pericyte
3
bronchial epithelial cell
3
cardiac fibroblast
3
choroid plexus epithelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of prostate
3
eye
3
fibroblast of lung
3
gabaergic neuron
3
globus pallidus
3
glomerular endothelial cell
3
hepatic stellate cell
3
keratinocyte
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
layer of hippocampus
3
mesodermal cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neural cell
3
neuron
3
neuronal stem cell
3
parathyroid adenoma
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
skeletal muscle tissue
3
skin fibroblast
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
thoracic aorta
3
tongue
3
trophoblast
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
3
uterus
2
22Rv1
2
A172
2
ACHN
2
AG10803
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
Caki2
2
Daoy
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12878
2
GM13976
2
GM13977
2
GM20000
2
GM23248
2
H4
2
HAP-1
2
HL-60
2
HT-29
2
HUES6
2
HeLa-S3
Organ
2
blood
2
bodily fluid
Life stage
1
adult
Date released
September, 2022
1
February, 2021
1
June, 2020
Software used
1
encode-ccres
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
renal pelvis
month_released!
September, 2022
month_released!!
September, 2022
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR396CCK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE K562
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP