Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
27
common myeloid progenitor, CD34-positive
23
B cell
19
fibroblast
18
monocyte
15
macrophage
14
CD4-positive, alpha-beta memory T cell
13
pericyte cell
12
excitatory neuron
12
natural killer cell
11
CD8-positive, alpha-beta T cell
11
smooth muscle cell
10
T cell
10
astrocyte
10
regulatory T cell
9
CD4-positive, alpha-beta T cell
9
T-helper 1 cell
8
CD14-positive monocyte
8
CD8-positive, alpha-beta memory T cell
8
trophoblast cell
7
T-helper 17 cell
7
T-helper 2 cell
7
foreskin fibroblast
7
mononuclear cell
7
neurosphere
7
osteoblast
7
skeletal muscle satellite cell
6
fibroblast of lung
6
glutamatergic neuron
6
skeletal muscle myoblast
5
erythroblast
5
fibroblast of cardiac tissue
5
hepatic stellate cell
5
inhibitory neuron
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
skeletal muscle fiber
4
T-cell
4
adipocyte
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
mast cell
4
memory B cell
4
neutrophil
4
peripheral blood mononuclear cell
4
skin fibroblast
3
cardiac fibroblast
3
CD1c-positive myeloid dendritic cell
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
cardiac fibroblast
3
cardiac muscle cell
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
gabaergic neuron
3
mesenchymal stem cell
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
type I muscle cell
3
type II muscle cell
2
Muller cell
2
T follicular helper cell
2
acute myeloid leukemia cell
2
astrocyte of the spinal cord
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain pericyte
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
enteric neuron
2
enteric smooth muscle cell
2
erythrocyte
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of gingiva
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
gamma-delta T cell
2
glial cell
2
leukocyte
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
myofibroblast cell
2
naive regulatory T cell
2
neuron
2
neuronal stem cell
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic stellate cell
2
plasma cell
2
plasmacytoid dendritic cell
2
regular ventricular cardiac myocyte
2
schwann cell
2
smooth muscle cell of the esophagus
2
stromal cell of bone marrow
1
B-Lymphocytes
1
B-lymphocyte
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Glioblastoma
1
Ishikawa
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
colon goblet cell
1
conventional dendritic cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
dendritic cell
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell of artery
1
erythroid cell
1
extravillous trophoblast
1
fetal thymocyte
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
hepatoblast
1
immature natural killer cell
1
intestinal tuft cell
1
islet of Langerhans
1
kidney interstitial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
luteal cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary stem cell
1
mature NK T cell
1
melanocyte
1
metanephros
1
microglial cell
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
neoplastic cell
1
neural cell
1
non-classical monocyte
1
non-neuronal cell
1
pancreatic immune cell
1
peripheral blood stem cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
preadipocyte
1
primordial germ cell
1
proximal tubule cells with injury markers
1
pulmonary interstitial fibroblast
1
regular atrial cardiac myocyte
1
regular cardiac myocyte
1
renal epithelial cell
1
retinal bipolar neuron
1
skeletal muscle fibroblast
1
somatic gonadal cell
1
stellate neuron
1
stromal cell
1
sympathetic neuron
1
trophoblast giant cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Organ
3
connective tissue
Life stage
2
unknown
Date released
1
February, 2021
1
June, 2020
1
September, 2022
Software used
1
encode-ccres
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
epithelium
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR197PKJ
released
Annotation file set
: Candidate regulatory elements for BSS00344 fibroblast of peridontal ligament from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR534TSK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of peridontal ligament
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585DKC
released
Annotation file set
: Accessible chromatin annotation for Others HPdLF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP