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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
binding sites
3
candidate regulatory elements
3
chromatin state
3
histone modifications
2
accessible chromatin
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
2
snATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
12
foreskin keratinocyte
8
foreskin fibroblast
6
dermis blood vessel endothelial cell
6
lower leg skin
5
keratinocyte
5
skin fibroblast
4
fibroblast of dermis
3
GM23248
3
RPMI7951
3
dermis microvascular lymphatic vessel endothelial cell
3
suprapubic skin
2
SK-MEL-5
2
dermis lymphatic vessel endothelial cell
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 4.7 Cell Line
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
1
BJ
1
COLO829
1
basal cell of epidermis
1
epidermal melanocyte
1
fibroblast of skin of abdomen
1
granular cell of epidermis
1
iPS DF 4.7
1
skin of body
Organ
5
epithelium
5
skin of body
Life stage
3
unknown
Date released
2
November, 2021
2
September, 2022
1
February, 2021
Software used
2
macs
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
2
Bing Ren, UCSD
Project
3
AMP
2
ENCODE
RFA
3
AMP
2
ENCODE3
files.file_type!
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Showing 5 of 5 results
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Download
FileSet
DSR024RGW
released
Annotation file set
: Candidate regulatory elements for BSS01071 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR643WNK
released
Annotation file set
: Candidate regulatory elements for BSS01068 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR919NQU
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR774OBV
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR245WVH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE keratinocyte
Lab:
AMP-T2D consortium
Project:
AMP