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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
chromatin state
2
target gene predictions
0
accessible chromatin
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
21
A549
21
retina
20
common myeloid progenitor, CD34-positive
20
pigmented layer of retina
17
hematopoietic multipotent progenitor cell
14
B cell
12
adrenal gland
11
spleen
11
stomach
10
liver
9
MCF-7
9
natural killer cell
8
body of pancreas
8
gastrocnemius medialis
8
pancreas
8
sigmoid colon
8
thyroid gland
8
transverse colon
7
K562
7
Peyer's patch
7
adipose tissue
7
heart left ventricle
7
omental fat pad
7
tibial nerve
7
upper lobe of left lung
6
CD14-positive monocyte
6
CD8-positive, alpha-beta T cell
6
caudate nucleus
6
endocrine pancreas
6
esophagus squamous epithelium
6
hepatocyte
6
layer of hippocampus
6
lower leg skin
6
ovary
5
CD4-positive, alpha-beta T cell
5
CD8-positive, alpha-beta memory T cell
5
HeLa-S3
5
ascending aorta
5
breast epithelium
5
endothelial cell
5
esophagus muscularis mucosa
5
fibroblast
5
gastroesophageal sphincter
5
islet of Langerhans
5
mononuclear cell
5
parathyroid adenoma
5
psoas muscle
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
T cell
4
T-helper 1 cell
4
adipocyte
4
angular gyrus
4
aorta
4
cerebellum
4
cingulate gyrus
4
colonic mucosa
4
coronary artery
4
duodenal mucosa
4
endothelial cell of hepatic sinusoid
4
esophagus
4
fibroblast of breast
4
glutamatergic neuron
4
kidney
4
kidney tubule cell
4
macrophage
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
peripheral blood mononuclear cell
4
prostate gland
4
right atrium auricular region
4
skeletal muscle tissue
4
small intestine
4
stomach smooth muscle
4
testis
4
thoracic aorta
4
tibial artery
4
vagina
3
Ammon's horn
3
CD4-positive, alpha-beta memory T cell
3
LNCaP clone FGC
3
MCF 10A
3
T-helper 2 cell
3
T47D
3
cerebellar cortex
3
dermis blood vessel endothelial cell
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
fibroblast of lung
3
frontal cortex
3
globus pallidus
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney glomerular epithelial cell
3
lung
3
mast cell
3
middle frontal gyrus
3
putamen
3
regulatory T cell
3
smooth muscle cell
3
subcutaneous adipose tissue
3
suprapubic skin
3
uterus
2
A172
2
ACC112
2
ACHN
2
AG10803
2
Brodmann (1909) area 46
2
C4-2B
2
Caki2
2
DOHH2
2
GM04503
2
GM04504
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
KBM-7
2
KMS-11
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MM.1S
2
NB4
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJSA1
2
SK-MEL-5
2
SU-DHL-6
2
SW480
2
T-cell
2
bipolar neuron
2
endocardial cell
2
fibroblast of dermis
2
heart
2
heart right ventricle
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
mammary epithelial cell
2
mammary gland epithelial cell
2
medulla oblongata
2
mesenchymal stem cell
2
midbrain
2
middle frontal area 46
2
mucosa of stomach
2
muscle cell
2
naive T cell
2
neuronal stem cell
2
occipital lobe
2
pancreatic alpha cell
2
pancreatic beta cell
2
pericyte cell
2
pons
2
regular ventricular cardiac myocyte
2
right cardiac atrium
2
right lobe of liver
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
superior temporal gyrus
2
urinary bladder
1
cardiac fibroblast
1
8988T
1
A-673 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309
1
AG09309 cell
1
AG09319
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
COLO829
1
Caco-2
1
Caco-2 cell
1
GM10248
1
GM10266
1
GM12875
Organ
4
kidney
Life stage
27
embryonic
4
adult
2
fetal
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR636DQS
released
Annotation file set
: Candidate regulatory elements for BSS01097 kidney from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR103NJL
released
Annotation file set
: Candidate regulatory elements for BSS01096 kidney from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR778MFT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR023URV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney
Lab:
AMP-T2D consortium
Project:
AMP