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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
binding sites
2
chromatin state
2
histone modifications
2
target gene predictions
1
accessible chromatin
1
eQTL
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
DNase-seq
4
ChIP-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
43
stomach
42
heart
39
kidney
34
muscle of arm
33
lung
31
brain
30
small intestine
29
adrenal gland
29
muscle of leg
29
retina
28
large intestine
28
muscle of back
27
placenta
26
left lung
23
right lung
22
A549
22
B cell
21
renal cortex interstitium
21
renal pelvis
21
right kidney
21
thymus
20
common myeloid progenitor, CD34-positive
20
pigmented layer of retina
19
fibroblast
18
endothelial cell
18
hematopoietic multipotent progenitor cell
18
left kidney
18
monocyte
17
liver
17
spleen
16
macrophage
16
spinal cord
15
neural progenitor cell
14
heart left ventricle
13
natural killer cell
12
excitatory neuron
12
foreskin keratinocyte
12
pericyte cell
12
smooth muscle cell
11
CD8-positive, alpha-beta T cell
11
hepatocyte
11
sigmoid colon
10
MCF-7
10
T cell
10
adipocyte
10
pancreas
10
trophoblast cell
9
adipose tissue
9
gastrocnemius medialis
9
ovary
9
retinal pigment epithelial cell
9
thyroid gland
9
tibial nerve
9
transverse colon
8
EndoC_BH1
8
K562
8
Peyer's patch
8
astrocyte
8
body of pancreas
8
chorionic villus
8
endothelial cell of umbilical vein
8
foreskin fibroblast
8
muscle of trunk
8
pancreatic ductal cell
8
psoas muscle
8
regulatory T cell
8
testis
8
upper lobe of left lung
7
H9
7
T-helper 1 cell
7
caudate nucleus
7
esophagus squamous epithelium
7
heart right ventricle
7
islet of Langerhans
7
left renal cortex interstitium
7
left renal pelvis
7
neurosphere
7
omental fat pad
7
pancreatic acinar cell
7
pancreatic beta cell
7
right renal pelvis
6
CD14-positive monocyte
6
CD4-positive, alpha-beta T cell
6
SGBS preadipocytes
6
breast epithelium
6
cardiac muscle cell
6
coronary artery
6
dermis blood vessel endothelial cell
6
embryonic stem cell
6
endocrine pancreas
6
endothelial cell of hepatic sinusoid
6
endothelial cell of lymphatic vessel
6
esophagus muscularis mucosa
6
fibroblast of cardiac tissue
6
glutamatergic neuron
6
layer of hippocampus
6
lower leg skin
6
mesenchymal stem cell
6
pancreatic alpha cell
6
right atrium auricular region
6
right renal cortex interstitium
6
skeletal muscle satellite cell
6
tibial artery
5
CD8-positive, alpha-beta memory T cell
5
HeLa-S3
5
SK-N-DZ
5
T-helper 2 cell
5
ascending aorta
5
chondrocyte
5
erythroblast
5
eye
5
foreskin melanocyte
5
gastroesophageal sphincter
5
glomerular visceral epithelial cell
5
hepatic stellate cell
5
inhibitory neuron
5
kidney tubule cell
5
mononuclear cell
5
neuronal stem cell
5
parathyroid adenoma
5
prostate gland
5
skeletal muscle fiber
5
skin fibroblast
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
5
thoracic aorta
5
tongue
5
trophoblast
4
Ammon's horn
4
HEK293
4
HepG2
4
SK-N-SH
4
angular gyrus
4
aorta
4
cerebellum
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endocardial cell
4
endodermal cell
4
esophagus
4
fibroblast of breast
4
frontal cortex
4
globus pallidus
4
kidney glomerular epithelial cell
4
limb
4
mammary gland epithelial cell
4
mast cell
4
memory B cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
neural cell
4
neuron
4
pancreatic delta cell
4
pancreatic stellate cell
4
peripheral blood mononuclear cell
4
putamen
4
skeletal muscle myoblast
4
skeletal muscle tissue
4
stomach smooth muscle
4
subcutaneous adipose tissue
4
type II pneumocyte
4
urinary bladder
4
uterus
4
vagina
3
A172
3
ACHN
3
CD4-positive, alpha-beta memory T cell
3
CMK
3
Caki2
3
Daoy
3
GM04503
3
GM04504
3
GM12878
3
GM23248
3
H4
3
HAP-1
3
HL-60
3
HT-29
3
HUES6
3
IMR-90
3
KBM-7
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
M059J
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-3
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
Organ
5
prostate gland
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
2
encode-ccres
2
r
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
gamma-delta T cell
relevant_life_stage!
unknown
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR387FEM
released
Annotation file set
: Candidate regulatory elements for BSS01459 prostate gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR651CJF
released
Annotation file set
: Candidate regulatory elements for BSS01456 prostate gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR362EVG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE prostate gland
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR798GVK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE prostate gland
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR790PVU
released
Annotation file set
: Accessible chromatin annotation for Prostate Prostate gland from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP