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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
target gene predictions
0
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
18
monocyte
14
fibroblast
13
endothelial cell
12
excitatory neuron
11
macrophage
11
pericyte cell
9
astrocyte
8
B cell
8
smooth muscle cell
7
endothelial cell of umbilical vein
7
erythroblast
6
CD4-positive, alpha-beta memory T cell
6
T cell
6
pancreatic beta cell
6
regulatory T cell
5
CD8-positive, alpha-beta T cell
5
T-helper 17 cell
5
inhibitory neuron
5
keratinocyte
5
osteoblast
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic ductal cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
5
trophoblast cell
4
T-helper 1 cell
4
fibroblast of cardiac tissue
4
foreskin keratinocyte
4
hepatocyte
4
memory B cell
4
pancreatic delta cell
4
retinal pigment epithelial cell
4
skeletal muscle myoblast
4
skin fibroblast
4
type II pneumocyte
3
CD14-positive, CD16-negative classical monocyte
3
T-helper 2 cell
3
bronchial epithelial cell
3
colon epithelial cell
3
common myeloid progenitor, CD34-positive
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
fibroblast of lung
3
glomerular endothelial cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
neurosphere
3
renal cortical epithelial cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
cardiac fibroblast
2
CD1c-positive myeloid dendritic cell
2
CD8-positive, alpha-beta memory T cell
2
Muller cell
2
T follicular helper cell
2
acute myeloid leukemia cell
2
adipocyte
2
alternatively activated macrophage
2
aortic endothelial cell
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain microvascular endothelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
ciliated cell
2
club cell
2
dermis lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of hepatic sinusoid
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of dermis
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
foreskin fibroblast
2
gabaergic neuron
2
gamma-delta T cell
2
glial cell
2
glomerular visceral epithelial cell
2
glutamatergic neuron
2
hepatic stellate cell
2
iris pigment epithelial cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mammary epithelial cell
2
mammary gland epithelial cell
2
mature natural killer cell
2
mature neutrophil
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
mesothelial cell
2
naive regulatory T cell
2
neutrophil
2
non-pigmented ciliary epithelial cell
2
oligodendrocyte precursor cell
2
plasma cell
2
plasmacytoid dendritic cell
2
pulmonary artery endothelial cell
2
schwann cell
2
skeletal muscle cell
2
smooth muscle cell of the brain vasculature
2
smooth muscle cell of the esophagus
1
B-Lymphocytes
1
B-lymphocyte
1
CD14-positive monocyte
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
Glioblastoma
1
Ishikawa
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
astrocyte of the spinal cord
1
basal cell of epidermis
1
brain pericyte
1
cardiac endothelial cell
1
cardiac muscle cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
conventional dendritic cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
dermis blood vessel endothelial cell
1
eccrine cell
1
endothelial cell of artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
erythrocyte
1
erythroid cell
1
extravillous trophoblast
1
fetal thymocyte
1
fibroblast of gingiva
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
foreskin melanocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
goblet cell
1
granular cell of epidermis
1
hepatoblast
1
immature natural killer cell
1
intestinal tuft cell
1
islet of Langerhans
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
lung microvascular endothelial cell
1
lung neuroendocrine cell
1
luteal cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
metanephros
1
microglial cell
1
mononuclear cell
1
myeloid dendritic cell
1
myoepithelial cell
1
myofibroblast cell
1
naive T cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neoplastic cell
1
neural cell
1
neuroendocrine cell
Life stage
adult
1
unknown
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
relevant_life_stage!
adult
Showing 1 of 1 results
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Download
FileSet
DSR899YVI
released
Annotation file set
: Chromatin states for BSS01279 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP