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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
0
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
4
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
14
fibroblast
12
excitatory neuron
11
macrophage
10
pericyte cell
7
astrocyte
6
smooth muscle cell
5
T cell
5
erythroblast
5
inhibitory neuron
4
B cell
3
skeletal muscle fiber
3
skeletal muscle satellite cell
2
CD8-positive, alpha-beta T cell
2
Muller cell
2
basal cell
2
blood vessel smooth muscle cell
2
ciliated cell
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gabaergic neuron
2
glutamatergic neuron
2
megakaryocyte
2
memory B cell
2
mesangial cell
2
natural killer cell
2
oligodendrocyte precursor cell
2
schwann cell
2
smooth muscle cell of the esophagus
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
alveolar macrophage
1
colon goblet cell
1
conventional dendritic cell
1
endothelial cell of artery
1
erythrocyte
1
extravillous trophoblast
1
fetal thymocyte
1
glial cell
1
hepatic stellate cell
1
hepatoblast
1
intestinal tuft cell
1
islet of Langerhans
1
luteal cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
metanephros
1
microglial cell
1
monocyte
1
myofibroblast cell
1
naive B cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuron
1
non-classical monocyte
1
oligodendrocyte
1
pancreatic stellate cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
plasma cell
1
plasmacytoid dendritic cell
1
regular atrial cardiac myocyte
1
regulatory T cell
1
retinal bipolar neuron
1
skeletal muscle fibroblast
1
skin fibroblast
1
stellate neuron
1
stromal cell
1
sympathetic neuron
1
trophoblast giant cell
1
type I muscle cell
1
type II muscle cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Date released
3
November, 2021
1
April, 2020
Software used
3
macs
Lab
3
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
AMP
3
ENCODE
1
LungMap
RFA
3
ENCODE3
1
LungMap2
award.project!
AMP
organ_slims!
epithelium
Showing 4 of 4 results
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Download
FileSet
DSR608YQN
released
Annotation file set
: ATAC-seq peaks in B cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR995HIR
released
Annotation file set
: Accessible chromatin annotation of Fetal B Lymphocyte 3 (NPY+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR143LGZ
released
Annotation file set
: Accessible chromatin annotation of Fetal B Lymphocyte 2 (CXCR5+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114OHW
released
Annotation file set
: Accessible chromatin annotation of Fetal B Lymphocyte 1 (SPIB+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE