Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
6
target gene predictions
5
chromatin state
3
accessible chromatin
3
binding sites
2
gene expression
2
histone modifications
2
variant allelic effects
Annotation Category
8
cis-regulatory elements
Annotation type Category
5
ChIP-seq
2
snATAC-seq
1
DNase-seq
Available data
5
bed bed9
3
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
5
GRCh38
Organism
8
Homo sapiens
Biosample type
6
cell line
2
primary cell
Biosample term
26
heart
26
kidney
26
retina
22
stomach
20
brain
20
pigmented layer of retina
19
A549
18
monocyte
17
muscle of arm
17
muscle of leg
16
lung
16
small intestine
15
adrenal gland
15
placenta
14
large intestine
14
neural progenitor cell
13
B cell
13
common myeloid progenitor, CD34-positive
13
left lung
13
liver
13
muscle of back
12
right lung
12
thymus
11
adipocyte
11
embryonic stem cell
11
heart left ventricle
11
hematopoietic multipotent progenitor cell
11
renal pelvis
11
right kidney
10
renal cortex interstitium
9
CD4-positive, alpha-beta memory T cell
9
hepatocyte
9
islet of Langerhans
9
left kidney
9
retinal pigment epithelial cell
9
spinal cord
8
EndoC_BH1
8
K562
8
adipose tissue
8
pancreas
8
regulatory T cell
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
T cell
7
endothelial cell of umbilical vein
7
left cardiac atrium
7
mature neutrophil
7
natural killer cell
7
tibial nerve
6
MCF-7
6
SGBS preadipocytes
6
T-helper 1 cell
6
caudate nucleus
6
coronary artery
6
endothelial cell
6
heart right ventricle
6
mesenchymal stem cell
6
mononuclear cell
6
osteoblast
6
pancreatic beta cell
6
pancreatic ductal cell
6
sigmoid colon
6
tibial artery
6
trophoblast cell
5
CD14-positive, CD16-negative classical monocyte
5
CD8-positive, alpha-beta T cell
5
T-helper 17 cell
5
T-helper 2 cell
5
chondrocyte
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
gastrocnemius medialis
5
ovary
5
pancreatic alpha cell
5
psoas muscle
5
right atrium auricular region
5
skeletal muscle myoblast
5
temporal lobe
5
thyroid gland
5
transverse colon
4
CD14-positive monocyte
4
HepG2
4
Peyer's patch
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
ascending aorta
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
fibroblast of lung
4
frontal cortex
4
glomerular visceral epithelial cell
4
glutamatergic neuron
4
kidney tubule cell
4
layer of hippocampus
4
macrophage
4
mammary gland epithelial cell
4
muscle of trunk
4
omental fat pad
4
pancreatic acinar cell
4
pancreatic delta cell
4
pancreatic stellate cell
4
skeletal muscle satellite cell
4
skin fibroblast
4
smooth muscle cell
4
testis
4
thoracic aorta
4
upper lobe of left lung
3
cardiac fibroblast
3
Ammon's horn
3
CD4-positive, alpha-beta T cell
3
GM12878
3
H1-hESC
3
HeLa-S3
3
KARPAS-422 cell
3
NAMALWA cell
3
SK-N-DZ
3
breast epithelium
3
bronchial epithelial cell
3
cardiac muscle cell
3
cerebellum
3
choroid plexus epithelial cell
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
fibroblast of dermis
3
foreskin fibroblast
3
globus pallidus
3
glomerular endothelial cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
keratinocyte
3
kidney glomerular epithelial cell
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
memory B cell
3
midbrain
3
mucosa of rectum
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
neurosphere
3
occipital lobe
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
stomach smooth muscle
3
subcutaneous adipose tissue
3
substantia nigra
3
superior temporal gyrus
3
tongue
3
trophoblast
3
urinary bladder
2
22Rv1
2
A172
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
DG-75 cell
2
Daoy
2
ESC derived cell line
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM18507
2
GM19240
2
GM23248
Disease term
5
breast cancer
Organ
6
mammary gland
2
musculature of body
Life stage
5
adult
Date released
5
September, 2022
2
February, 2024
1
June, 2020
Software used
5
chromhmm
3
macs
Lab
6
AMP-T2D consortium
2
Stephen Parker, UMich
Project
8
AMP
ENCODE
RFA
6
AMP
2
AMP2
award.project!
ENCODE
biosample_term_name!
neurosphere
Showing 8 of 8 results
table-tab-icon
matrix-icon
Download
FileSet
DSR097QMG
released
Annotation file set
: Chromatin states for BSS01244 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR983KRN
released
Annotation file set
: Chromatin states for BSS01243 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR213OTC
released
Annotation file set
: Chromatin states for BSS01240 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR128LSP
released
Annotation file set
: Chromatin states for BSS01235 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR624TOZ
released
Annotation file set
: Chromatin states for BSS01226 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887UQH
released
Annotation file set
: Cell type chromatin broad peaks and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR353GUO
released
Annotation file set
: Cell type chromatin broad peaks and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR645VUL
released
Annotation file set
: Accessible chromatin annotation for Breast MCF-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP