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Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
8
gene expression
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
26
heart
26
kidney
26
retina
22
stomach
20
brain
20
pigmented layer of retina
19
A549
18
monocyte
17
muscle of arm
muscle of leg
16
B cell
16
fibroblast
16
lung
16
small intestine
15
adrenal gland
15
endothelial cell
15
placenta
14
large intestine
14
neural progenitor cell
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
left lung
13
macrophage
13
muscle of back
12
liver
12
right lung
12
thymus
11
T cell
11
embryonic stem cell
11
heart left ventricle
11
hematopoietic multipotent progenitor cell
11
pericyte cell
11
renal pelvis
11
right kidney
10
hepatocyte
10
renal cortex interstitium
10
retinal pigment epithelial cell
9
CD4-positive, alpha-beta memory T cell
9
astrocyte
9
islet of Langerhans
9
left kidney
9
smooth muscle cell
9
spinal cord
8
EndoC_BH1
8
adipose tissue
8
pancreas
8
pancreatic beta cell
8
pancreatic ductal cell
8
regulatory T cell
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
K562
7
adipocyte
7
erythroblast
7
fibroblast of cardiac tissue
7
left cardiac atrium
7
mature neutrophil
7
natural killer cell
7
pancreatic acinar cell
7
pancreatic alpha cell
7
tibial nerve
6
CD8-positive, alpha-beta T cell
6
MCF-7
6
SGBS preadipocytes
6
T-helper 1 cell
6
coronary artery
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
glutamatergic neuron
6
heart right ventricle
6
mononuclear cell
6
osteoblast
6
sigmoid colon
6
skeletal muscle satellite cell
6
tibial artery
6
trophoblast cell
5
CD14-positive, CD16-negative classical monocyte
5
T-helper 17 cell
5
T-helper 2 cell
5
caudate nucleus
5
chondrocyte
5
foreskin keratinocyte
5
gastrocnemius medialis
5
inhibitory neuron
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
ovary
5
pancreatic delta cell
5
psoas muscle
5
right atrium auricular region
5
skin fibroblast
5
thyroid gland
5
transverse colon
4
CD14-positive monocyte
4
CD4-positive, alpha-beta T cell
4
Peyer's patch
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
ascending aorta
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
frontal cortex
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
keratinocyte
4
kidney tubule cell
4
memory B cell
4
muscle of trunk
4
omental fat pad
4
pancreatic stellate cell
4
skeletal muscle myoblast
4
temporal lobe
4
testis
4
thoracic aorta
4
type II pneumocyte
4
upper lobe of left lung
3
cardiac fibroblast
3
Ammon's horn
3
HeLa-S3
3
HepG2
3
KARPAS-422 cell
3
NAMALWA cell
3
SK-N-DZ
3
breast epithelium
3
bronchial epithelial cell
3
cardiac muscle cell
3
cerebellum
3
choroid plexus epithelial cell
3
cortical cell of adrenal gland
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
fibroblast of dermis
3
fibroblast of lung
3
foreskin fibroblast
3
gabaergic neuron
3
globus pallidus
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
luminal epithelial cell of mammary gland
3
medulla oblongata
3
midbrain
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuron
3
neurosphere
3
occipital lobe
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle fiber
3
skeletal muscle tissue
3
superior temporal gyrus
3
tongue
3
trophoblast
3
type I pneumocyte
3
urinary bladder
2
22Rv1
2
A172
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
DG-75 cell
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
Organ
2
embryo
Life stage
1
embryonic
Date released
1
June, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
biosample_term_name!
GM12878
muscle of leg
lab.title!
Stephen Parker, UMich
Showing 2 of 2 results
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Download
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR165RXW
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP