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Schema
Citing CMDGA
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Annotation type
2
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
8
K562
3
GM12878
3
NAMALWA cell
2
CMK
2
GM06990
2
GM19240
2
HAP-1
2
HL-60
2
KBM-7
2
OCI-LY7
2
RPMI8226
1
GM12875
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
NB4
1
peripheral blood stem cell
Disease term
1
acute promyelocytic leukemia
Organ
2
blood
2
bodily fluid
Life stage
1
adult
Date released
1
June, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
May, 2021
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Download
FileSet
DSR291VRD
released
Annotation file set
: Chromatin states for BSS00702 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585SZU
released
Annotation file set
: Accessible chromatin annotation for Blood HL-60 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP