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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
26
kidney
11
renal pelvis
11
right kidney
10
renal cortex interstitium
9
left kidney
4
glomerular visceral epithelial cell
4
kidney tubule cell
3
glomerular endothelial cell
3
kidney glomerular epithelial cell
3
left renal cortex interstitium
3
left renal pelvis
3
renal cortical epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
2
ACHN
2
Caki2
2
HEK293
2
RCC 7860
2
epithelial cell of proximal tubule
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
renal cell carcinoma
1
G401
1
HEK293T
1
cortex of kidney
1
glomerular epithelium
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
metanephros
1
parietal epithelial cell
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
ureteric bud
Disease term
1
renal cell adenocarcinoma
Organ
2
kidney
0
pericardium
Life stage
1
adult
Date released
1
June, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
metanephros
Showing 2 of 2 results
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Download
FileSet
DSR656AIC
released
Annotation file set
: Chromatin states for BSS01474 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR199VQC
released
Annotation file set
: Accessible chromatin annotation for Kidney RCC 7860 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP