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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
7
endothelial cell of umbilical vein
6
endothelial cell of hepatic sinusoid
3
cardiac fibroblast
3
endothelial cell of lymphatic vessel
2
aortic endothelial cell
2
brain microvascular endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
fibroblast of pulmonary artery
2
kidney capillary endothelial cell
2
pulmonary artery endothelial cell
2
smooth muscle cell of the brain vasculature
1
fibroblast of the aortic adventitia
1
lung microvascular endothelial cell
1
placental villus capillary endothelial cell
Organ
2
brain
2
epithelium
2
vasculature
Life stage
1
unknown
Date released
1
January, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR525PVH
released
Annotation file set
: Chromatin states for BSS00218 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR536GJU
released
Annotation file set
: Accessible chromatin annotation of brain choroid plexus cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP