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Schema
Citing CMDGA
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Annotation type
9
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
gene expression
1
histone modifications
0
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
23
retina
20
pigmented layer of retina
18
monocyte
16
endothelial cell
16
fibroblast
13
excitatory neuron
13
macrophage
12
kidney
11
embryonic stem cell
10
adipocyte
10
neural progenitor cell
10
pericyte cell
9
islet of Langerhans
9
retinal pigment epithelial cell
9
smooth muscle cell
8
B cell
8
EndoC_BH1
8
astrocyte
8
hepatocyte
8
pancreatic ductal cell
7
T cell
7
erythroblast
7
heart
7
mature neutrophil
7
pancreatic acinar cell
7
pancreatic beta cell
6
CD8-positive, alpha-beta T cell
6
SGBS preadipocytes
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
heart left ventricle
6
left cardiac atrium
6
liver
6
pancreas
6
pancreatic alpha cell
6
skeletal muscle satellite cell
5
CD14-positive, CD16-negative classical monocyte
5
chondrocyte
5
endothelial cell of umbilical vein
5
inhibitory neuron
5
osteoblast
5
regulatory T cell
5
skeletal muscle fiber
4
CD4-positive, alpha-beta T cell
4
alternatively activated macrophage
4
brain
4
coronary artery
4
fibroblast of cardiac tissue
4
memory B cell
4
mesenchymal stem cell
4
muscle of leg
4
natural killer cell
4
pancreatic delta cell
4
pancreatic stellate cell
4
tibial artery
4
tibial nerve
4
type II pneumocyte
3
cardiac fibroblast
3
HepG2
T-helper 1 cell
3
caudate nucleus
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
glomerular visceral epithelial cell
3
heart right ventricle
3
hepatic stellate cell
3
inflammatory macrophage
3
keratinocyte
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
right atrium auricular region
3
skeletal muscle myoblast
3
skin fibroblast
3
stomach
3
subcutaneous adipose tissue
3
temporal lobe
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
Ammon's horn
2
CD4-positive helper T cell
2
DG-75 cell
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
K562
2
KARPAS-422 cell
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
SUDHL5
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
U-266 cell
2
Z-138
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
angular gyrus
2
aorta
2
ascending aorta
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle cell
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
frontal cortex
2
gamma-delta T cell
2
glial cell
2
globus pallidus
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mammary epithelial cell
2
mammary gland epithelial cell
2
mature natural killer cell
2
medulla oblongata
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
midbrain
naive regulatory T cell
2
neuron
2
occipital lobe
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
omental fat pad
2
pancreatic polypeptide-secreting cell
2
plasma cell
2
plasmacytoid dendritic cell
2
pons
2
putamen
2
renal cortical epithelial cell
2
renal pelvis
2
right cardiac atrium
2
schwann cell
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
superior temporal gyrus
2
thoracic aorta
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-Positive T-Lymphocytes
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
Date released
September, 2022
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
T-helper 1 cell
naive regulatory T cell
month_released!
September, 2022
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP