Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
18
monocyte
16
fibroblast
15
endothelial cell
14
B cell
13
common myeloid progenitor, CD34-positive
12
excitatory neuron
12
macrophage
11
pericyte cell
10
T cell
9
CD4-positive, alpha-beta memory T cell
9
astrocyte
9
hepatocyte
9
smooth muscle cell
8
regulatory T cell
7
CD8-positive, alpha-beta memory T cell
7
endothelial cell of umbilical vein
7
erythroblast
7
mature neutrophil
7
pancreatic beta cell
7
skeletal muscle satellite cell
6
T-helper 1 cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
mononuclear cell
6
natural killer cell
6
osteoblast
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic ductal cell
5
CD14-positive, CD16-negative classical monocyte
5
CD8-positive, alpha-beta T cell
5
T-helper 17 cell
5
T-helper 2 cell
5
fibroblast of cardiac tissue
5
inhibitory neuron
5
keratinocyte
5
skeletal muscle fiber
5
skeletal muscle myoblast
4
CD14-positive monocyte
4
CD4-positive, alpha-beta T cell
4
alternatively activated macrophage
4
fibroblast of lung
4
foreskin keratinocyte
4
hepatic stellate cell
4
kidney tubule cell
4
mammary gland epithelial cell
4
memory B cell
4
pancreatic delta cell
4
retinal pigment epithelial cell
4
skin fibroblast
4
type II pneumocyte
3
cardiac fibroblast
3
bronchial epithelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
fibroblast of dermis
3
gabaergic neuron
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
inflammatory macrophage
3
kidney glomerular epithelial cell
3
luminal epithelial cell of mammary gland
3
mesenchymal stem cell
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
renal cortical epithelial cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
CD1c-positive myeloid dendritic cell
2
Muller cell
2
T follicular helper cell
2
acute myeloid leukemia cell
2
adipocyte
2
aortic endothelial cell
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain microvascular endothelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
ciliated cell
2
club cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of breast
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
foreskin fibroblast
2
gamma-delta T cell
2
glial cell
2
iris pigment epithelial cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
leukocyte
2
mammary epithelial cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
myoepithelial cell of mammary gland
2
naive regulatory T cell
2
neuron
2
neutrophil
2
non-pigmented ciliary epithelial cell
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasma cell
2
plasmacytoid dendritic cell
2
pulmonary artery endothelial cell
2
schwann cell
2
skeletal muscle cell
2
smooth muscle cell of the brain vasculature
2
smooth muscle cell of the esophagus
1
B-Lymphocytes
1
B-lymphocyte
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
Glioblastoma
1
Ishikawa
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
astrocyte of the spinal cord
1
basal cell of epidermis
1
brain pericyte
1
cardiac endothelial cell
1
cardiac muscle cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
conventional dendritic cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
eccrine cell
1
endothelial cell of artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
erythrocyte
1
erythroid cell
1
extravillous trophoblast
1
fetal thymocyte
1
fibroblast of gingiva
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
foreskin melanocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
goblet cell
1
granular cell of epidermis
1
hepatoblast
1
immature natural killer cell
1
intestinal tuft cell
1
islet of Langerhans
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lung microvascular endothelial cell
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
Organ
2
epithelium
2
eye
Life stage
1
unknown
Date released
1
June, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
bed gappedPeak
organ_slims!
embryo
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR302XLF
released
Annotation file set
: Chromatin states for BSS00743 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR950BXJ
released
Annotation file set
: Accessible chromatin annotation for Others HIPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP