Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
1
bed bed9
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
20
brain
6
caudate nucleus
5
temporal lobe
4
angular gyrus
4
frontal cortex
4
layer of hippocampus
3
cardiac fibroblast
3
Ammon's horn
3
SK-N-DZ
3
cerebellum
3
choroid plexus epithelial cell
3
cingulate gyrus
3
globus pallidus
3
medulla oblongata
3
midbrain
3
pons
3
putamen
3
substantia nigra
2
A172
2
BE(2)-C
2
Brodmann (1909) area 46
2
Daoy
2
M059J
2
SK-N-MC
2
SK-N-SH
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
brain pericyte
2
cerebellar cortex
2
inferior parietal cortex
2
middle frontal gyrus
1
Glioblastoma
1
H54
1
U-87 MG
1
hippocampal neuron
1
medulloblastoma
1
mid-frontal lobe
1
prefrontal cortex
Organ
26
kidney
3
brain
Life stage
2
adult
Date released
1
June, 2020
1
May, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR641KFN
released
Annotation file set
: Chromatin states for BSS01270 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR176VXD
released
Annotation file set
: Accessible chromatin annotation for Neural Midbrains from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR865KNM
released
Annotation file set
: Accessible chromatin of midbrain ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP