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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
0
accessible chromatin
0
sQTL
Annotation Category
2
Gene expression levels
Annotation type Category
2
single cell RNA-seq
Available data
2
tsv
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
23
retina
20
pigmented layer of retina
18
monocyte
11
EndoC_BH1
10
kidney
10
neural progenitor cell
8
islet of Langerhans
8
retinal pigment epithelial cell
7
hepatocyte
7
induced pluripotent stem cell
7
pancreatic ductal cell
6
SGBS preadipocytes
6
embryonic stem cell
5
chondrocyte
5
heart
5
liver
5
osteoblast
5
pancreas
5
pancreatic acinar cell
5
pancreatic beta cell
5
pancreatic stellate cell
4
B cell
4
adipocyte
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
4
pancreatic alpha cell
4
regulatory T cell
3
cardiac fibroblast
3
CD8-positive, alpha-beta T cell
3
T-helper 1 cell
3
coronary artery
3
glomerular visceral epithelial cell
3
heart left ventricle
3
pancreatic MUC5B+ductal cell
3
pancreatic alpha+beta cell
3
pancreatic cycling alpha cell
3
pancreatic delta cell
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic quiescent stellate cell
3
right atrium auricular region
3
stomach
3
subcutaneous adipose tissue
3
tibial artery
3
tibial nerve
2
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
Ammon's horn
2
B Cell
2
CD4-positive helper T cell
2
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
HepG2
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
Rh-4 cell
2
T Cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
bone marrow cell
2
brain
2
brain pericyte
2
cardiac muscle cell
2
caudate nucleus
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
endothelial cell of umbilical vein
2
erythroid cell
2
fibroblast of cardiac tissue
2
frontal cortex
2
gamma-delta T cell
2
globus pallidus
2
glomerular endothelial cell
2
hepatic stellate cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
mature natural killer cell
2
medulla oblongata
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
midbrain
2
muscle of leg
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
occipital lobe
2
omental fat pad
2
pons
2
putamen
2
renal cortical epithelial cell
2
renal pelvis
2
skeletal muscle myoblast
2
skin fibroblast
2
spinal cord
2
spleen
2
superior temporal gyrus
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
2
epithelium
2
kidney
Life stage
2
adult
Date released
2
September, 2023
Software used
2
deseq2
Lab
2
KPMP
Project
2
KPMP
RFA
2
KPMP
annotation_type_category!
snATAC-seq
Showing 2 of 2 results
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Download
FileSet
DSR160BGX
released
Annotation file set
: Differential activity annotation of Degenerative Intercalated Cell Type A between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR515OOA
released
Annotation file set
: Differential activity annotation of Degenerative Intercalated Cell Type A between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP