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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
18
chromatin state
2
eQTL
1
accessible chromatin
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
DNase-seq
Available data
1
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
18
fibroblast
17
macrophage
16
monocyte
13
excitatory neuron
12
endothelial cell
10
neural progenitor cell
9
kidney
9
pericyte cell
8
astrocyte
8
islet of Langerhans
7
T cell
7
hepatocyte
7
smooth muscle cell
6
endothelial cell of hepatic sinusoid
6
lymphoblastoid cell line
5
coronary artery
5
erythroblast
5
inhibitory neuron
5
pancreatic acinar cell
5
pancreatic ductal cell
4
heart left ventricle
4
pancreas
4
pancreatic beta cell
4
putamen
4
right atrium auricular region
4
subcutaneous adipose tissue
4
tibial artery
4
tibial nerve
3
cardiac fibroblast
3
B cell
3
blood cell
3
brain
3
cerebellum
3
colon epithelial cell
3
cortical cell of adrenal gland
3
enterocyte
3
frontal cortex
3
heart
3
liver
3
omental fat pad
3
osteoblast
3
pancreatic alpha cell
3
skeletal muscle fiber
3
skeletal muscle satellite cell
3
skin of body
3
substantia nigra
3
type II pneumocyte
2
Ammon's horn
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
amygdala
2
anterior cingulate cortex
2
ascending aorta
2
blood vessel smooth muscle cell
2
cardiac muscle cell
2
caudate nucleus
2
endocardial cell
2
endothelial cell of lymphatic vessel
2
enteric neuron
2
enteric smooth muscle cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gabaergic neuron
2
glutamatergic neuron
2
hepatic stellate cell
2
hypothalamus
2
iPSC derived cell line
2
keratinocyte
2
mesangial cell
2
mesothelial cell
2
microglial cell
2
muscle
2
nucleus accumbens
2
oligodendrocyte precursor cell
2
pancreatic stellate cell
2
regulatory T cell
2
retina
2
retinal pigment epithelial cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
spleen
2
type I pneumocyte
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
CD8-positive, alpha-beta T cell
1
EndoC_BH1
1
HepG2
1
Leydig cell
1
Schwann cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
adipose tissue
1
adrenal gland
1
alveolar macrophage
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell
1
basal cell of epidermis
1
body of pancreas
1
brain microvascular endothelial cell
1
brain pericyte
1
breast
1
cardiac endothelial cell
1
cardiac precursors
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated cell
1
ciliated epithelial cell
1
club cell
1
colon goblet cell
1
colon sigmoid
1
cortex
1
cortex of kidney
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
eccrine cell
1
endothelial cell of umbilical vein
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
extravillous trophoblast
1
fat cell
1
fetal heart
1
fetal thymocyte
1
forelimb muscle
1
foveolar cell of stomach
1
gastric goblet cell
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
goblet cell
1
granular cell of epidermis
1
heart right ventricle
1
helper T cell
1
hepatoblast
1
hippocampal neuron
1
intestinal tuft cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
layer of hippocampus
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
left ventricle myocardium
1
lower motor neuron
1
lung
1
lung neuroendocrine cell
1
luteal cell
1
mast cell
1
mature NK T cell
1
medulla oblongata
1
megakaryocyte
1
melanocyte
1
memory B cell
1
metanephros
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
muscle of arm
1
muscle of leg
1
myoepithelial cell
1
naive B cel
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neuron
1
neutrophil
1
non keratinizing barrier epithelial cell
1
occipital lobe
1
oligodendrocyte
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic delta cell
Organ
3
brain
Life stage
1
fetal
Date released
2
January, 2022
1
January, 2020
Software used
2
qTLtools
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
mammary gland
Showing 3 of 3 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP