Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
17
chromatin state
16
target gene predictions
3
histone modifications
2
eQTL
1
accessible chromatin
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
23
retina
22
monocyte
20
islet of Langerhans
20
macrophage
20
pigmented layer of retina
18
fibroblast
17
endothelial cell
13
excitatory neuron
11
liver
10
neural progenitor cell
10
pericyte cell
10
smooth muscle cell
9
T cell
9
kidney
8
B cell
8
EndoC_BH1
8
astrocyte
8
pancreatic beta cell
8
pancreatic ductal cell
8
retinal pigment epithelial cell
7
hepatocyte
7
lymphoblastoid cell line
7
pancreatic acinar cell
7
pancreatic alpha cell
7
regulatory T cell
7
subcutaneous adipose tissue
6
adipocyte
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
5
CD8-positive, alpha-beta T cell
5
adipose tissue
5
chondrocyte
5
erythroblast
5
inhibitory neuron
5
natural killer cell
5
osteoblast
5
pancreatic delta cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
SGBS preadipocytes
4
T-helper 1 cell
4
coronary artery
4
fibroblast of cardiac tissue
4
memory B cell
4
mesenchymal stem cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
pancreas
4
pancreatic stellate cell
4
putamen
4
right atrium auricular region
4
stomach
4
tibial artery
4
tibial nerve
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
3
T follicular helper cell
3
T-helper 17 cell
3
T-helper 2 cell
3
blood cell
3
brain
3
caudate nucleus
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
frontal cortex
3
gabaergic neuron
3
heart
3
naive B cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
omental fat pad
3
skin fibroblast
3
skin of body
3
spinal cord
3
spleen
3
substantia nigra
3
type I pneumocyte
2
Ammon's horn
2
CD4-positive helper T cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
adipose-derived stem cell
2
adrenal gland
2
amygdala
2
anterior cingulate cortex
2
aortic endothelial cell
2
articular chondrocyte
2
basal cell
2
blood
2
blood vessel smooth muscle cell
2
bone marrow cell
2
capillary endothelial cell
2
cartilage tissue
2
central memory CD8-positive, alpha-beta T cell
2
cerebellum
2
ciliated cell
2
club cell
2
cortex of kidney
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
esophagus muscularis mucosa
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
glomerular visceral epithelial cell
2
heart left ventricle
2
hepatic stellate cell
2
hypothalamus
2
iPSC derived cell line
2
keratinocyte
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mature natural killer cell
2
medulla oblongata
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
microglial cell
2
midbrain
2
muscle
2
naive regulatory T cell
2
neuron
2
neutrophil
2
nucleus accumbens
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
ovary
2
pancreatic polypeptide-secreting cell
2
placenta
2
plasma cell
2
plasmacytoid dendritic cell
2
prostate gland
2
schwann cell
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
small intestine
2
smooth muscle cell of the esophagus
2
testis
2
thyroid gland
2
transverse colon
2
uterus
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
Organ
3
brain
Date released
2
January, 2022
January, 2020
1
June, 2020
Software used
2
qTLtools
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
HUES8
frontal cortex
month_released!
January, 2020
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR147QJJ
released
Annotation file set
: Accessible chromatin annotation for Neural Fetal brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP