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Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
18
chromatin state
16
target gene predictions
3
histone modifications
2
accessible chromatin
2
eQTL
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
2
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
2
DNase-seq
2
RNA-seq
Available data
2
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
4
tissue
Biosample term
24
retina
20
pigmented layer of retina
19
islet of Langerhans
11
kidney
11
liver
8
subcutaneous adipose tissue
6
adipose tissue
6
pancreas
5
coronary artery
5
heart
5
putamen
5
right atrium auricular region
5
tibial artery
5
tibial nerve
4
brain
4
caudate nucleus
4
frontal cortex
4
heart left ventricle
4
omental fat pad
4
stomach
3
Ammon's horn
3
cerebellum
3
skin of body
3
spleen
3
substantia nigra
2
adrenal gland
2
amygdala
2
anterior cingulate cortex
2
ascending aorta
2
blood
2
cartilage tissue
2
cortex of kidney
2
esophagus muscularis mucosa
2
globus pallidus
2
hypothalamus
2
medulla oblongata
2
midbrain
2
muscle of leg
2
nucleus accumbens
2
occipital lobe
2
ovary
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placenta
2
pons
2
prostate gland
2
renal pelvis
skeletal muscle tissue
2
small intestine
2
spinal cord
2
superior temporal gyrus
2
testis
2
thyroid gland
2
transverse colon
2
uterus
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
Peyer's patch
1
Schwann cell
1
abdominal aorta artery
1
body of pancreas
1
breast
1
breast epithelium
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
chorion membrane
1
colon sigmoid
1
cortex
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
embryonic facial prominence
1
endothelial cell
1
esophagus
1
esophagus mucosa
1
esophagus squamous epithelium
1
eye
1
fetal heart
1
forelimb muscle
1
gastrocnemius medialis
1
gastrocnemius medialis(Muscle - Skeletal)
1
glomerular epithelium
1
heart right ventricle
1
inferior parietal cortex
1
large intestine
1
layer of hippocampus
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
left ventricle myocardium
1
limb
1
lung
1
middle frontal gyrus
1
minor salivary gland
1
muscle of arm
1
nephron tubule
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pituitary gland
1
prefrontal cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
renal cortex interstitium
1
renal cortex tubule
1
renal glomerulus
1
right kidney
1
right lobe of liver
1
right lung
1
right renal cortex interstitium
1
right renal pelvis
1
sigmoid colon
1
synovial joint
1
thoracic aorta
1
thymus
1
tissue-resident macrophage
1
tongue
1
trophoblast
1
type B pancreatic cell
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
vagina
1
visceral abdominal adipose tissue
Organ
4
brain
Life stage
1
fetal
Date released
2
January, 2022
1
January, 2020
1
June, 2020
Software used
2
macs
2
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
skeletal muscle tissue
Showing 4 of 4 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR147QJJ
released
Annotation file set
: Accessible chromatin annotation for Neural Fetal brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP