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Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
10
chromatin state
10
target gene predictions
1
accessible chromatin
1
binding sites
1
histone modifications
0
gene expression
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
RNA-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
23
endothelial cell
23
retina
20
pigmented layer of retina
18
monocyte
16
epithelial cell of proximal tubule
16
fibroblast
15
glomerular endothelial cell
15
macrophage
14
pancreatic ductal cell
13
excitatory neuron
11
hepatocyte
11
pancreatic beta cell
10
kidney
10
neural progenitor cell
10
pancreatic acinar cell
10
pericyte cell
10
smooth muscle cell
9
extended pluripotent stem (EPS) cells
9
pancreatic alpha cell
9
progenitor cell of endocrine pancreas
9
retinal pigment epithelial cell
8
B cell
8
EndoC_BH1
8
astrocyte
8
pancreatic delta cell
7
T cell
7
adipocyte
7
glomerular visceral epithelial cell
7
islet of Langerhans
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
skeletal muscle fiber
6
CD8-positive, alpha-beta T cell
6
SGBS preadipocytes
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
heart
6
mesangial cell
6
natural killer cell
6
pancreatic stellate cell
6
skeletal muscle satellite cell
5
chondrocyte
5
erythroblast
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
kidney loop of Henle thick ascending limb epithelial cell
5
osteoblast
5
pancreas
5
regulatory T cell
4
fibroblast of cardiac tissue
4
gamma-delta T cell
4
hepatic stellate cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
liver
4
memory B cell
4
mesenchymal stem cell
4
pancreatic polypeptide-secreting cell
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
3
cardiac fibroblast
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
T-helper 1 cell
3
T-helper 17 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adipose tissue
3
adult endothelial progenitor cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
glial cell
3
heart left ventricle
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney resident macrophage
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
nephron progenitor
3
plasma cell
3
right atrium auricular region
3
skin fibroblast
3
stomach
3
tibial artery
3
tibial nerve
3
type I pneumocyte
2
Ammon's horn
2
CD4-positive helper T cell
2
HepG2
2
Kupffer cell
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
S-shaped body
2
Schwann cell
2
T follicular helper cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle cell
2
cardiomyocytes (cardiac muscle cell)
2
caudate nucleus
2
central memory CD8-positive, alpha-beta T cell
2
cholangiocyte
2
choroid plexus epithelial cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
frontal cortex
2
globus pallidus
2
heart right ventricle
2
keratinocyte
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
kidney loop of Henle descending limb epithelial cell
2
kidney tubule cell
2
left cardiac atrium
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mast cell
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
RNA-seq
biosample_term_name!
Afferent / Efferent Arteriole Endothelial Cell
kidney loop of Henle thick ascending limb epithelial cell
Showing 1 of 1 results
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Download
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP