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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
chromatin state
3
Fine-mapped variants
3
accessible chromatin
3
target gene predictions
2
eQTL
2
gene expression
2
variant allelic effects
Annotation Category
3
cis-regulatory elements
2
Gene expression levels
Annotation type Category
2
DNase-seq
2
RNA-seq
1
ATAC-seq
Available data
3
bed bed3+
2
bigWig
2
tsv
File set status
5
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
5
tibial nerve
Organ
465
epithelium
252
kidney
137
connective tissue
113
pancreas
72
vasculature
61
brain
60
eye
51
blood vessel
48
liver
47
heart
38
musculature of body
25
limb
24
intestine
22
embryo
20
adipose tissue
19
artery
19
bone element
16
lung
15
skin of body
13
blood
13
bodily fluid
12
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
skeleton
7
gonad
7
lymphatic vessel
7
mammary gland
6
esophagus
6
prostate gland
5
nerve
5
uterus
4
placenta
4
ureter
3
bronchus
3
lymphoid tissue
3
ovary
3
penis
3
small intestine
3
spinal cord
3
spleen
3
testis
3
thyroid gland
3
vein
2
bone marrow
2
breast
2
mouth
2
thymus
2
tongue
2
urinary bladder
1
nose
1
pericardium
1
pituitary gland
1
trachea
1
vagina
Life stage
3
adult
Date released
2
February, 2020
1
January, 2020
1
June, 2020
1
November, 2019
Software used
3
macs
2
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
natural killer cell
Showing 5 of 5 results
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Download
FileSet
DSR940ZJY
released
Annotation file set
: Accessible chromatin annotation for Neural Tibial Nerve from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703QSS
released
Annotation file set
: Gene expression summary of TPM of nerve tibial from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR435IKZ
released
Annotation file set
: Gene expression levels of nerve tibial from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR427ZWO
released
Annotation file set
: Accessible chromatin annotation of nerve tibial from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR234KHJ
released
Annotation file set
: Accessible chromatin annotation of tibial nerve
Lab:
AMP-T2D consortium
Project:
AMP