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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
target gene predictions
1
variant allelic effects
0
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
26
endothelial cell
21
hepatocyte
20
pigmented layer of retina
17
epithelial cell of proximal tubule
16
EndoC_BH1
16
glomerular endothelial cell
14
pancreatic ductal cell
11
pancreatic beta cell
10
endothelial cell of hepatic sinusoid
10
pancreatic acinar cell
10
pancreatic alpha cell
9
retinal pigment epithelial cell
8
glomerular visceral epithelial cell
8
pancreatic delta cell
7
kidney loop of Henle thin ascending limb epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
kidney connecting tubule epithelial cell
4
pancreatic polypeptide-secreting cell
4
type II pneumocyte
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Connecting Tubule Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
Medullary Thick Ascending Limb Cell
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
S-shaped body
3
Transitional Principal-Intercalated Cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
hepatocyte(AFP)
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney tubule cell
3
renal cortical epithelial cell
3
type I pneumocyte
2
aortic endothelial cell
2
capillary endothelial cell
2
cholangiocyte
2
choroid plexus epithelial cell
2
club cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
keratinocyte
2
kidney epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mesothelial cell
2
pancreatic endothelial cell
2
renal principal cell
2
renal vesicle
2
ureteric bud
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
breast - mammary tissue
1
breast epithelium
1
bronchial epithelial cell
1
cardiac endothelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
eccrine cell
1
endothelial cell of coronary artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of distal tubule
1
epithelial cell of prostate
1
esophagus - mucosa
1
esophagus squamous epithelium
1
foreskin keratinocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glomerular epithelium
1
goblet cell
1
granular cell of epidermis
1
intermediate endothelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lung neuroendocrine cell
1
mammary epithelial cell
1
meso-epithelial cell
1
myoepithelial cell
1
neuroendocrine cell
1
non keratinizing barrier epithelial cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha+beta cell
1
pancreatic cycling alpha cell
1
pancreatic gamma+epsilon cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
placental villus capillary endothelial cell
1
proximal tubule
1
pulmonary artery endothelial cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal cortex tubule
1
renal intercalated cell
1
respiratory goblet cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
tracheal epithelial cell
1
type B pancreatic cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
urothelial cell
Organ
3
adrenal gland
3
epithelium
Date released
3
November, 2021
Software used
3
macs
Lab
3
Bing Ren, UCSD
Project
3
ENCODE
RFA
3
ENCODE3
Showing 3 of 3 results
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Download
FileSet
DSR261HLL
released
Annotation file set
: Accessible chromatin annotation of Transitional Zone Cortical Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR484DFA
released
Annotation file set
: Accessible chromatin annotation of Fetal Adrenal Cortical Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR621GBJ
released
Annotation file set
: Accessible chromatin annotation of Cortical Epithelial-like from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE