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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
histone modifications
1
binding sites
1
candidate regulatory elements
1
chromatin state
1
gene expression
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
DNase-seq
1
scRNA-seq
1
snATAC-seq
Available data
3
bed bed3+
2
bigWig
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
21
hepatocyte
10
endothelial cell of hepatic sinusoid
5
liver
4
hepatic stellate cell
3
hepatocyte(AFP)
2
HepG2
1
HuH-7
1
pancreatic endothelial cell
1
right lobe of liver
Organ
4
connective tissue
4
liver
Life stage
2
adult
Date released
1
February, 2021
1
January, 2020
1
June, 2020
1
November, 2021
Software used
3
macs
1
r
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
biosample_term_name!
adult endothelial progenitor cell
Showing 4 of 4 results
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Download
FileSet
DSR274TCU
released
Annotation file set
: Accessible chromatin annotation of Fetal Hepatic Stellate Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR954PZY
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Hepatic Stellate Cells from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575AGN
released
Annotation file set
: Accessible chromatin annotation for Liver Hepatic Stellate Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR691EDI
released
Annotation file set
: Accessible chromatin annotation of liver hepatic stellate cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP