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Schema
Citing CMDGA
Clear Filters
Annotation type
40
candidate regulatory elements
22
target gene predictions
19
chromatin state
4
accessible chromatin
1
eQTL
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
DNase-seq
1
RNA-seq
1
snATAC-seq
Available data
4
bed bed3+
1
bigWig
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
tissue
1
primary cell
Biosample term
4
stomach
1
esophagus - gastroesophageal junction
1
foveolar cell of stomach
1
gastric goblet cell
1
parietal cell
1
peptic cell
1
stomach neuroendocrine cell
Organ
5
stomach
1
epithelium
Life stage
1
adult
Date released
3
June, 2020
1
March, 2024
1
November, 2021
Software used
4
macs
1
r
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
Showing 5 of 5 results
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Download
FileSet
DSR007TCR
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Stomach.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR570UBU
released
Annotation file set
: Accessible chromatin annotation of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR355FEE
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR769DZK
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Gastric primary sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR936OND
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Fetal stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP