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Schema
Citing CMDGA
Clear Filters
Annotation type
5
chromatin state
3
binding sites
2
histone modifications
1
gene expression
1
target gene predictions
0
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
ATAC-seq
2
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
in vitro differentiated cells
Biosample term
89
monocyte
33
CD8-positive, alpha-beta T cell
18
fibroblast
16
endothelial cell
16
neural progenitor cell
14
macrophage
12
excitatory neuron
11
breast cancer cell
10
pericyte cell
9
Rhabdomyosarcoma
9
gastric cancer cell
9
pancreatic ductal cell
9
smooth muscle cell
8
B cell
8
T cell
8
astrocyte
8
neuroblastoma cell
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
hepatocyte
7
pancreatic acinar cell
6
B-lymphoblastoid cell line
Chondroid Chordoma
6
HepG2
6
fibroblast of cardiac tissue
6
hESC cell
6
liposarcoma
6
neuroblastoma cell line
6
pancreatic alpha cell
6
pancreatic beta cell
6
squamous cell lung carcinoma
5
T-cell acute lymphoblastic leukemia
5
brain
5
erythroblast
5
heart
5
hepatic stellate cell
5
inhibitory neuron
5
keratinocyte
5
kidney
5
melanoma cell
5
natural killer cell
5
osteoblast
5
osteosarcoma
5
pancreas
5
pancreatic delta cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
Rh-4 cell
4
acute myeloid leukemia
4
acute myeloid leukemia cell
4
adipocyte
4
lymphoblastoid cell line
4
mammary epithelial cell
4
mesenchymal stem cell
4
neuronal stem cell
4
pancreatic stellate cell
4
regulatory T cell
4
retinal pigment epithelial cell
4
rhabdomyosarcoma cell
4
skin fibroblast
4
stomach
4
type II pneumocyte
3
cardiac fibroblast
3
B-lymphocyte
3
COLO205
3
Ewing sarcoma
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
Th1 cell
3
bone marrow cell
3
bronchial epithelial cell
3
cardiac muscle cell
3
caudate nucleus
3
choroid plexus epithelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
diffuse large B-cell lymphoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
erythroid cell
3
esophageal squamous cell carcinoma
3
foreskin fibroblast
3
glial cell
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
heart left ventricle
3
islet of Langerhans
3
liver
3
lymphoblast
3
mammary gland epithelial cell
3
midbrain
3
occipital lobe
3
pancreatic ductal adenocarcinoma
3
placenta
3
prostate gland
3
putamen
3
retina
3
skeletal muscle myoblast
3
spinal cord
3
superior temporal gyrus
3
tracheal epithelial cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
BE(2)-C
2
BJ cell
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
Caco-2 cell
2
D341 Med cell
2
G-401 cell
2
GM06990
2
GM12864
2
GM12865
2
GM12878
2
GM18507
2
GM19240
2
GM23248
2
H1-hESC
2
H7-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
Kasumi-1
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MCF10A-Er-Src cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Muller cell
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rh-5 cell
2
SAEC
2
SK-N-DZ
2
SK-N-MC
2
SK-N-SH_RA
2
SKMC
2
SW480
2
Saos-2 cell
2
T-47D cell
2
Th17 cell
2
U-266 cell
2
U-87 MG
2
U2OS
2
U937
2
WERI-Rb-1
2
WI-38 cell
Z-138
2
ZR-75-1 cell
2
aortic adventitial fibroblast
2
basal cell
2
blood vessel smooth muscle cell
2
brain pericyte
2
capillary endothelial cell
2
cardiac myocyte cell derived cell line
Date released
2
February, 2021
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
ATAC-seq
biosample_term_name!
Chondroid Chordoma
Z-138
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR927IPU
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Expanded_potential_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134CON
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP