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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
target gene predictions
2
binding sites
2
chromatin state
1
histone modifications
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
bronchial epithelial cell
2
club cell
Organ
240
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
56
kidney
44
vasculature
38
liver
35
bodily fluid
34
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Date released
1
April, 2020
1
February, 2021
1
June, 2020
1
November, 2021
Software used
3
macs
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
2
AMP
1
ENCODE
1
LungMap
RFA
2
AMP
1
ENCODE3
1
LungMap2
biosample_term_name!
GM06990
fetal cardiomyocyte
Showing 4 of 4 results
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Download
FileSet
DSR848VTY
released
Annotation file set
: ATAC-seq peaks in club cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR678WWH
released
Annotation file set
: Accessible chromatin annotation of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR655FKJ
released
Annotation file set
: Histone modifications annotation for Lung Bronchial_epithelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR613FQC
released
Annotation file set
: Accessible chromatin annotation for Lung Bronchial epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP