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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
21
candidate regulatory elements
19
target gene predictions
18
chromatin state
3
binding sites
2
histone modifications
1
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
104
monocyte
35
CD8-positive, alpha-beta T cell
26
neural progenitor cell
24
retina
20
pigmented layer of retina
17
endothelial cell
14
macrophage
13
excitatory neuron
12
hepatocyte
12
kidney
11
breast cancer cell
10
B cell
10
pancreatic ductal cell
10
retinal pigment epithelial cell
9
EndoC_BH1
9
Rhabdomyosarcoma
9
astrocyte
9
gastric cancer cell
9
smooth muscle cell
8
T cell
8
embryonic stem cell
8
islet of Langerhans
8
neuroblastoma cell
8
pancreatic acinar cell
8
pancreatic beta cell
7
HepG2
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
pancreatic alpha cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
hESC cell
6
heart
6
liposarcoma
6
liver
6
natural killer cell
6
neuroblastoma cell line
6
pancreas
6
regulatory T cell
6
squamous cell lung carcinoma
5
SGBS preadipocytes
5
T-cell acute lymphoblastic leukemia
5
brain
5
erythroblast
5
inhibitory neuron
5
keratinocyte
5
melanoma cell
5
osteosarcoma
5
pancreatic delta cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
Rh-4 cell
4
acute myeloid leukemia
4
acute myeloid leukemia cell
4
cardiac muscle cell
4
heart left ventricle
4
lymphoblastoid cell line
4
mammary epithelial cell
4
memory B cell
4
neuronal stem cell
4
rhabdomyosarcoma cell
4
stomach
4
type II pneumocyte
3
B-lymphocyte
3
CD4-positive helper T cell
3
COLO205
3
Ewing sarcoma
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
T-helper 1 cell
3
Th1 cell
3
adipose-derived stem cell
3
aortic endothelial cell
3
bone marrow cell
3
bronchial epithelial cell
3
caudate nucleus
3
choroid plexus epithelial cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
diffuse large B-cell lymphoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
erythroid cell
3
esophageal squamous cell carcinoma
3
gabaergic neuron
3
glial cell
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
glomerular visceral epithelial cell
3
lymphoblast
3
mammary gland epithelial cell
3
midbrain
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
occipital lobe
3
pancreatic ductal adenocarcinoma
3
placenta
3
plasma cell
3
prostate gland
3
putamen
3
right atrium auricular region
3
skeletal muscle myoblast
3
spinal cord
3
superior temporal gyrus
3
tibial artery
3
tibial nerve
3
tracheal epithelial cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
BE(2)-C
2
BJ cell
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caco-2 cell
2
D341 Med cell
2
G-401 cell
2
GM06990
2
GM12864
2
GM12865
2
GM12878
2
GM18507
2
GM19240
2
H1-hESC
2
H7-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
Kasumi-1
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MCF10A-Er-Src cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Muller cell
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rh-5 cell
2
SAEC
2
SK-N-DZ
2
SK-N-MC
2
SK-N-SH_RA
2
SKMC
2
SW480
2
Saos-2 cell
2
T follicular helper cell
2
T-47D cell
2
T-helper 17 cell
2
T-helper 2 cell
2
Th17 cell
2
U-266 cell
2
U-87 MG
2
U2OS
Organ
2
lung
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
connective tissue
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR140CWC
released
Annotation file set
: Histone modifications annotation for Pancreas AsPC-1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761KYR
released
Annotation file set
: Histone modifications annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR008HJP
released
Annotation file set
: Accessible chromatin annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP