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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
21
candidate regulatory elements
18
chromatin state
18
target gene predictions
2
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
103
monocyte
33
CD8-positive, alpha-beta T cell
26
neural progenitor cell
24
retina
20
pigmented layer of retina
11
breast cancer cell
9
EndoC_BH1
9
Rhabdomyosarcoma
9
gastric cancer cell
9
retinal pigment epithelial cell
8
neuroblastoma cell
7
HepG2
7
diffuse intrinsic pontine glioma
7
embryonic stem cell
7
esophageal adenocarcinoma
7
islet of Langerhans
7
osteoblast
6
B cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
SGBS preadipocytes
6
chondrocyte
6
hESC cell
6
heart
6
hepatocyte
6
liposarcoma
6
neuroblastoma cell line
6
pancreas
6
squamous cell lung carcinoma
5
T-cell acute lymphoblastic leukemia
5
adipocyte
5
brain
5
kidney
5
liver
5
melanoma cell
5
osteosarcoma
5
regulatory T cell
4
Rh-4 cell
4
acute myeloid leukemia
4
acute myeloid leukemia cell
4
cardiac muscle cell
4
fibroblast of cardiac tissue
4
glutamatergic neuron
4
heart left ventricle
4
hepatic stellate cell
4
lymphoblastoid cell line
4
mammary epithelial cell
4
natural killer cell
4
neuronal stem cell
4
pancreatic ductal cell
4
rhabdomyosarcoma cell
4
stomach
3
cardiac fibroblast
3
B-lymphocyte
3
COLO205
3
Ewing sarcoma
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
T-helper 1 cell
3
Th1 cell
3
adipose-derived stem cell
3
aortic endothelial cell
3
bone marrow cell
3
bronchial epithelial cell
3
caudate nucleus
3
choroid plexus epithelial cell
3
coronary artery
3
diffuse large B-cell lymphoma
3
erythroid cell
3
esophageal squamous cell carcinoma
3
foreskin fibroblast
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
keratinocyte
3
lymphoblast
3
mesenchymal stem cell
3
midbrain
3
occipital lobe
3
pancreatic beta cell
3
pancreatic ductal adenocarcinoma
3
placenta
3
preadipocyte
3
prostate gland
3
putamen
3
right atrium auricular region
3
skeletal muscle myoblast
3
skin fibroblast
3
spinal cord
3
superior temporal gyrus
3
tibial artery
3
tibial nerve
3
tracheal epithelial cell
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
BE(2)-C
2
BJ cell
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
Caco-2 cell
2
D341 Med cell
2
G-401 cell
2
GM06990
2
GM12864
2
GM12865
2
GM12878
2
GM18507
2
GM19240
2
GM23248
2
H1-hESC
2
H7-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
Kasumi-1
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MCF10A-Er-Src cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rh-5 cell
2
SAEC
2
SK-N-DZ
2
SK-N-MC
2
SK-N-SH_RA
2
SKMC
2
SW480
2
Saos-2 cell
2
T cell
2
T follicular helper cell
2
T-47D cell
2
T-helper 17 cell
2
T-helper 2 cell
2
Th17 cell
2
U-266 cell
2
U-87 MG
2
U2OS
2
U937
2
WERI-Rb-1
2
WI-38 cell
2
Z-138
2
ZR-75-1 cell
2
adipose tissue
2
aortic adventitial fibroblast
2
astrocyte
2
brain pericyte
2
cardiac myocyte cell derived cell line
2
central memory CD8-positive, alpha-beta T cell
2
cerebellum
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
colon cancer cell line
2
cortex of kidney
2
dermal fibroblast
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
Organ
2
lung
Date released
1
February, 2021
1
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
RFA
2
AMP
biosample_term_name!
effector T cell
Showing 2 of 2 results
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Download
FileSet
DSR761KYR
released
Annotation file set
: Histone modifications annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR008HJP
released
Annotation file set
: Accessible chromatin annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP