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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
7
target gene predictions
6
binding sites
2
candidate regulatory elements
2
histone modifications
1
accessible chromatin
1
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
in vitro differentiated cells
2
cell line
1
primary cell
Biosample term
103
monocyte
32
CD8-positive, alpha-beta T cell
24
retina
20
pigmented layer of retina
11
breast cancer cell
9
EndoC_BH1
9
Rhabdomyosarcoma
9
gastric cancer cell
8
neuroblastoma cell
7
HepG2
7
islet of Langerhans
7
osteoblast
6
B-lymphoblastoid cell line
6
diffuse intrinsic pontine glioma
6
heart
6
hepatocyte
6
liposarcoma
6
pancreas
6
squamous cell lung carcinoma
5
Chondroid Chordoma
5
brain
5
esophageal adenocarcinoma
5
hESC cell
5
kidney
5
liver
5
melanoma cell
5
regulatory T cell
4
Rh-4 cell
4
acute myeloid leukemia
4
acute myeloid leukemia cell
4
fibroblast of cardiac tissue
4
glutamatergic neuron
4
heart left ventricle
4
hepatic stellate cell
4
lymphoblastoid cell line
4
mammary epithelial cell
4
osteosarcoma
4
pancreatic ductal cell
4
stomach
3
cardiac fibroblast
3
B-lymphocyte
3
COLO205
3
Ewing sarcoma
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
T-helper 1 cell
3
aortic endothelial cell
3
bone marrow cell
3
bronchial epithelial cell
3
cardiac muscle cell
3
caudate nucleus
3
choroid plexus epithelial cell
3
coronary artery
3
esophageal squamous cell carcinoma
3
foreskin fibroblast
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
keratinocyte
3
lymphoblast
3
midbrain
3
occipital lobe
3
pancreatic beta cell
3
placenta
3
preadipocyte
3
prostate gland
3
putamen
3
retinal pigment epithelial cell
3
right atrium auricular region
3
skeletal muscle myoblast
3
spinal cord
3
superior temporal gyrus
3
tibial artery
3
tibial nerve
3
tracheal epithelial cell
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
B cell
2
BE(2)-C
2
BJ cell
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caco-2 cell
2
D341 Med cell
2
G-401 cell
2
GM06990
2
GM12864
2
GM12865
2
GM12878
2
GM18507
2
GM19240
2
GM23248
2
H1-hESC
2
H7-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
Kasumi-1
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MCF10A-Er-Src cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rh-5 cell
2
SAEC
2
SK-N-DZ
2
SK-N-MC
2
SK-N-SH_RA
2
SKMC
2
SW480
2
Saos-2 cell
2
T follicular helper cell
2
T-47D cell
2
T-helper 17 cell
2
T-helper 2 cell
2
Th1 cell
2
Th17 cell
2
U-266 cell
2
U-87 MG
2
U2OS
2
U937
2
WERI-Rb-1
2
WI-38 cell
2
Z-138
2
ZR-75-1 cell
2
adipose tissue
2
aortic adventitial fibroblast
2
astrocyte
2
brain pericyte
2
cardiac myocyte cell derived cell line
2
central memory CD8-positive, alpha-beta T cell
2
cerebellum
2
colon cancer cell line
2
cortex of kidney
2
dermal fibroblast
2
diffuse large B-cell lymphoma
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
endothelial cell of umbilical vein
2
epithelial cell of prostate
2
epithelial ovarian cancer cell
2
erythroid cell
2
esophageal carcinoma
2
esophageal epithelial cell
2
fibroblast cell line
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
frontal cortex
2
gamma-delta T cell
2
glioblastoma multiforme cancer stem cell
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hESC H9
2
hematopoietic cell
2
immortal foreskin-derived fibroblast cell line cell
Organ
2
blood
2
bodily fluid
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
in vitro differentiated cells
Showing 3 of 3 results
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Download
FileSet
DSR138IOE
released
Annotation file set
: Histone modifications annotation for Neural Neural_progenitor_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549ZJZ
released
Annotation file set
: Histone modifications annotation for Blood GM12878 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR789FEO
released
Annotation file set
: Accessible chromatin annotation for Blood GM12878 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP