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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
25
target gene predictions
8
candidate regulatory elements
8
chromatin state
2
accessible chromatin
2
binding sites
2
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
104
monocyte
35
CD8-positive, alpha-beta T cell
26
neural progenitor cell
24
retina
20
pigmented layer of retina
18
fibroblast
17
endothelial cell
14
macrophage
13
excitatory neuron
12
hepatocyte
12
kidney
11
breast cancer cell
10
B cell
10
pancreatic ductal cell
10
pericyte cell
10
retinal pigment epithelial cell
9
EndoC_BH1
9
Rhabdomyosarcoma
9
astrocyte
9
gastric cancer cell
9
smooth muscle cell
8
T cell
8
embryonic stem cell
8
islet of Langerhans
8
neuroblastoma cell
8
pancreatic acinar cell
8
pancreatic beta cell
7
HepG2
7
adipocyte
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
osteoblast
7
pancreatic alpha cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
SGBS preadipocytes
6
chondrocyte
6
endothelial cell of hepatic sinusoid
6
fibroblast of cardiac tissue
6
glutamatergic neuron
6
hESC cell
6
heart
6
liposarcoma
6
liver
6
natural killer cell
6
neuroblastoma cell line
6
pancreas
6
regulatory T cell
6
squamous cell lung carcinoma
5
T-cell acute lymphoblastic leukemia
5
brain
5
erythroblast
5
hepatic stellate cell
5
inhibitory neuron
5
keratinocyte
5
melanoma cell
5
osteosarcoma
5
pancreatic delta cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
Rh-4 cell
4
acute myeloid leukemia
4
acute myeloid leukemia cell
4
cardiac muscle cell
4
heart left ventricle
4
lymphoblastoid cell line
4
mammary epithelial cell
4
memory B cell
4
mesenchymal stem cell
4
neuronal stem cell
4
pancreatic stellate cell
4
rhabdomyosarcoma cell
4
skin fibroblast
4
stomach
4
type II pneumocyte
3
cardiac fibroblast
3
B-lymphocyte
3
CD4-positive helper T cell
3
COLO205
3
Ewing sarcoma
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
T-helper 1 cell
3
Th1 cell
3
adipose-derived stem cell
3
aortic endothelial cell
3
bone marrow cell
3
bronchial epithelial cell
3
caudate nucleus
3
choroid plexus epithelial cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
diffuse large B-cell lymphoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
erythroid cell
3
esophageal squamous cell carcinoma
3
foreskin fibroblast
3
gabaergic neuron
3
glial cell
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
glomerular visceral epithelial cell
3
lymphoblast
3
mammary gland epithelial cell
3
midbrain
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
occipital lobe
3
pancreatic ductal adenocarcinoma
3
placenta
3
plasma cell
3
preadipocyte
3
prostate gland
3
putamen
3
right atrium auricular region
3
skeletal muscle myoblast
3
spinal cord
3
superior temporal gyrus
3
tibial artery
3
tibial nerve
3
tracheal epithelial cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
BE(2)-C
2
BJ cell
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caco-2 cell
2
D341 Med cell
2
G-401 cell
2
GM06990
2
GM12864
2
GM12865
2
GM12878
2
GM18507
2
GM19240
2
GM23248
2
H1-hESC
2
H7-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
Kasumi-1
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MCF10A-Er-Src cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Muller cell
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rh-5 cell
2
SAEC
Organ
2
blood
2
bodily fluid
2
embryo
Date released
2
February, 2021
2
June, 2020
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
club cell
Showing 4 of 4 results
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Download
FileSet
DSR157MZQ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855GPE
released
Annotation file set
: Histone modifications annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR227UQF
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP