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Schema
Citing CMDGA
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Annotation type
5
accessible chromatin
0
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
5
bigWig
File set status
5
released
Genome assembly (visualization)
7
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
20
fibroblast
18
pericyte cell
17
endothelial cell
13
monocyte
13
smooth muscle cell
12
excitatory neuron
11
macrophage
10
astrocyte
8
hepatocyte
6
colon epithelial cell
6
endothelial cell of hepatic sinusoid
6
olfactory receptor cell
5
T cell
5
cortical cell of adrenal gland
5
erythroblast
5
inhibitory neuron
5
pancreatic acinar cell
5
type II pneumocyte
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
gabaergic neuron
4
glutamatergic neuron
4
keratinocyte
4
luminal epithelial cell of mammary gland
4
pancreatic beta cell
4
pancreatic ductal cell
4
skeletal muscle satellite cell
4
smooth muscle cell of the esophagus
3
cardiac fibroblast
3
B cell
3
endocardial cell
3
endothelial cell of lymphatic vessel
3
enteric neuron
3
enterocyte
3
fibroblast of cardiac tissue
3
mesothelial cell
3
oligodendrocyte precursor cell
3
osteoblast
3
pancreatic alpha cell
3
schwann cell
3
skeletal muscle fiber
3
type I pneumocyte
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
Muller cell
2
alveolar macrophage
2
basal cell
2
basal cell of epidermis
2
cardiac endothelial cell
2
ciliated cell
2
club cell
2
colon goblet cell
2
eccrine cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
granular cell of epidermis
2
hepatic stellate cell
2
intestinal tuft cell
2
luteal cell
2
mammary gland epithelial cell
2
mast cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
microglial cell
2
myoepithelial cell
2
naive t cell
2
non keratinizing barrier epithelial cell
2
oligodendrocyte
2
pancreatic A cell
2
pancreatic delta cell
2
paneth cell
2
parietal cell
2
peptic cell
2
plasma cell
2
regular atrial cardiac myocyte
2
respiratory goblet cell
2
retinal pigment epithelial cell
2
skeletal muscle fibroblast
2
skin fibroblast
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
stromal cell
2
thyroid follicular cell
2
type B pancreatic cell
2
type I cell of adrenal cortex
2
type I muscle cell
2
type II cell of adrenal cortex
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
CD4-positive helper T cell
1
adipocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac muscle cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
endothelial cell of umbilical vein
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
gastric goblet cell
1
glial cell
1
glomerular endothelial cell
1
goblet cell
1
hepatoblast
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
lung neuroendocrine cell
1
megakaryocyte
1
metanephros
1
neuron
1
parietal epithelial cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
renal cortical epithelial cell
1
retinal bipolar neuron
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
sympathetic neuron
1
trophoblast giant cell
1
ureteric bud
Date released
5
November, 2021
Software used
5
macs
Lab
5
Bing Ren, UCSD
Project
5
ENCODE
RFA
5
ENCODE3
biosample_term_name!
CD8-positive, alpha-beta memory T cell
Showing 5 of 5 results
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Download
FileSet
DSR509HZN
released
Annotation file set
: Accessible chromatin annotation of Fetal Erythroblast 5 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR960EYD
released
Annotation file set
: Accessible chromatin annotation of Fetal Erythroblast 4 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR116GJM
released
Annotation file set
: Accessible chromatin annotation of Fetal Erythroblast 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR508KIM
released
Annotation file set
: Accessible chromatin annotation of Fetal Erythroblast 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR372XPV
released
Annotation file set
: Accessible chromatin annotation of Fetal Erythroblast 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE