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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
0
accessible chromatin
Annotation Category
1
Target gene links
Annotation type Category
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
in vitro differentiated cells
1
stem cell
Biosample term
55
HeLa-S3
40
H1-hESC
26
retina
25
heart
24
K562
24
stomach
20
A549
20
pigmented layer of retina
19
CD14-positive monocyte
19
HFFc6
19
monocyte
18
adrenal gland
18
brain
18
small intestine
17
kidney
17
lung
17
muscle of arm
16
muscle of leg
16
placenta
15
large intestine
15
thymus
14
common myeloid progenitor, CD34-positive
14
liver
13
left lung
13
muscle of back
12
B cell
12
right lung
11
renal pelvis
11
right kidney
10
adipose tissue
10
heart left ventricle
10
pancreas
10
pituitary stalk
10
renal cortex interstitium
10
spinal cord
10
spleen
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
GM12878
9
left kidney
9
psoas muscle
8
H9
8
sigmoid colon
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
islet of Langerhans
7
lymphocyte
7
osteoblast
7
ovary
7
regulatory T cell
6
T-helper 1 cell
6
coronary artery
6
endothelial cell of umbilical vein
6
gastrocnemius medialis
6
heart right ventricle
6
mononuclear cell
6
olfactory receptor cell
6
pancreatic ductal cell
6
thyroid gland
6
tibial nerve
6
transverse colon
6
trophoblast cell
5
CD8-positive, alpha-beta T cell
5
HUES8
5
HepG2
5
T-helper 17 cell
5
T-helper 2 cell
5
body of pancreas
5
caudate nucleus
5
fibroblast of cardiac tissue
5
muscle of trunk
5
natural killer cell
5
pancreatic beta cell
5
right atrium auricular region
5
tibial artery
4
Ammon's horn
4
CyT49
4
Peyer's patch
4
T cell
4
aorta
4
breast epithelium
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
foreskin keratinocyte
4
frontal cortex
4
glutamatergic neuron
4
hepatocyte
4
iPSC derived cell line
4
kidney tubule cell
4
omental fat pad
4
pancreatic acinar cell
4
pancreatic alpha cell
4
skeletal muscle myoblast
4
testis
4
trophoblast
4
upper lobe of left lung
3
cardiac fibroblast
3
GM18507
3
GM19240
3
H7-hESC
3
HAP-1
HCT116
3
HT-29
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
U937
3
ascending aorta
3
astrocyte
3
bronchial epithelial cell
3
cerebellum
3
choroid plexus epithelial cell
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
macrophage
3
mammary gland epithelial cell
3
medulla oblongata
3
midbrain
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
neutrophil
3
occipital lobe
3
pancreatic delta cell
3
pancreatic stellate cell
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
skin fibroblast
3
superior temporal gyrus
3
thoracic aorta
3
tongue
3
urinary bladder
3
uterus
2
22Rv1
2
A172
2
A673
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CD4-positive, alpha-beta T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM19238
2
GM19239
2
GM23248
2
H4
2
HCT-116 cell
Date released
1
March, 2020
Software used
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
HCT116
biosample_type!
in vitro differentiated cells
Showing 1 of 1 results
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Download
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP