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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
3
binding sites
2
accessible chromatin
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
4
Target gene links
2
cis-regulatory elements
Annotation type Category
5
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
6
bed bed3+
1
bigWig
File set status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
6
endothelial cell of umbilical vein
Organ
314
epithelium
166
connective tissue
125
kidney
118
brain
109
pancreas
107
musculature of body
96
embryo
94
intestine
93
lung
75
heart
69
bodily fluid
69
limb
67
blood
67
vasculature
61
uterus
57
skin of body
54
large intestine
51
blood vessel
48
eye
45
extraembryonic component
45
liver
38
stomach
31
bone element
28
adrenal gland
26
mammary gland
26
small intestine
21
placenta
20
adipose tissue
20
prostate gland
19
artery
17
lymph node
17
ureter
16
gonad
16
thymus
14
esophagus
14
penis
11
skeleton
11
spinal cord
10
pituitary gland
10
spleen
9
ovary
8
lymphoid tissue
8
thyroid gland
7
lymphatic vessel
6
bronchus
6
nerve
6
testis
6
vein
5
bone marrow
5
mouth
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
1
trachea
Life stage
3
newborn
Date released
2
September, 2022
1
June, 2020
1
March, 2020
1
May, 2020
1
May, 2021
Software used
2
r
1
abc
1
hiccups
1
macs
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
biosample_term_name!
pigmented layer of retina
Showing 6 of 6 results
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Download
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR690SAR
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HUVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR603NLX
released
Annotation file set
: Accessible chromatin of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP