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Schema
Citing CMDGA
Clear Filters
Annotation type
4
binding sites
2
accessible chromatin
2
histone modifications
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
DNase-seq
1
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
55
HeLa-S3
40
H1-hESC
26
retina
25
heart
24
K562
24
kidney
24
stomach
23
endothelial cell
21
monocyte
20
A549
20
pigmented layer of retina
19
CD14-positive monocyte
19
HFFc6
18
B cell
18
adrenal gland
18
brain
18
small intestine
17
lung
17
macrophage
17
muscle of arm
16
muscle of leg
16
placenta
16
smooth muscle cell
15
large intestine
15
neural progenitor cell
15
thymus
14
common myeloid progenitor, CD34-positive
14
liver
13
excitatory neuron
13
left lung
13
muscle of back
12
astrocyte
12
hepatocyte
12
right lung
11
T cell
11
hematopoietic multipotent progenitor cell
11
pancreatic beta cell
11
pancreatic ductal cell
11
renal pelvis
11
right kidney
10
CD8-positive, alpha-beta T cell
10
heart left ventricle
10
pancreas
10
pancreatic acinar cell
10
pancreatic alpha cell
10
pituitary stalk
10
renal cortex interstitium
10
retinal pigment epithelial cell
10
spinal cord
10
spleen
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
GM12878
9
left kidney
9
natural killer cell
9
pancreatic delta cell
9
psoas muscle
9
regulatory T cell
8
H9
8
glutamatergic neuron
8
islet of Langerhans
8
sigmoid colon
8
trophoblast cell
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
colon epithelial cell
7
embryonic stem cell
7
erythroblast
7
keratinocyte
7
lymphocyte
7
ovary
7
skeletal muscle satellite cell
6
T-helper 1 cell
6
coronary artery
6
dendritic cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
gastrocnemius medialis
6
heart right ventricle
6
mammary gland epithelial cell
6
memory B cell
6
mononuclear cell
6
olfactory receptor cell
6
thyroid gland
6
tibial nerve
6
transverse colon
6
type II pneumocyte
5
HUES8
5
HepG2
5
SGBS preadipocytes
5
T-helper 17 cell
5
T-helper 2 cell
5
body of pancreas
5
caudate nucleus
5
cortical cell of adrenal gland
5
foreskin keratinocyte
5
gabaergic neuron
5
inhibitory neuron
5
luminal epithelial cell of mammary gland
5
muscle of trunk
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
right atrium auricular region
5
skeletal muscle fiber
5
skeletal muscle myoblast
5
tibial artery
4
Ammon's horn
4
CD4-positive helper T cell
4
CD4-positive, alpha-beta T cell
4
CyT49
4
Peyer's patch
4
aorta
4
blood vessel smooth muscle cell
4
breast epithelium
4
cardiac muscle cell
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
epithelial cell of prostate
4
frontal cortex
4
glomerular visceral epithelial cell
4
iPSC derived cell line
4
kidney tubule cell
4
megakaryocyte
4
mesendoderm
4
pancreatic A cell
4
smooth muscle cell of the esophagus
4
testis
4
trophoblast
4
type B pancreatic cell
4
type I muscle cell
4
type I pneumocyte
4
type II muscle cell
4
upper lobe of left lung
3
GM18507
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
U937
3
activated CD4-positive, alpha-beta T cell
3
ascending aorta
3
basal cell
3
bipolar neuron
3
bronchial epithelial cell
3
cardiomyocytes (cardiac muscle cell)
3
cerebellum
3
choroid plexus epithelial cell
3
ciliated cell
3
club cell
3
endocardial cell
3
endometrium adenocarcinoma
3
enteric neuron
3
enterocyte
3
esophagus
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
mesothelial cell
3
midbrain
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neuron
3
neurosphere
3
neutrophil
3
occipital lobe
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic polypeptide-secreting cell
3
plasma cell
3
plasmacytoid dendritic cell
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
3
schwann cell
Disease term
1
neuroblastoma
Organ
connective tissue
2
brain
Life stage
1
child
Date released
2
June, 2020
1
September, 2022
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
connective tissue
Showing 3 of 3 results
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Download
FileSet
DSR343OTF
released
Annotation file set
: Target gene predictions for BSS00102 BE(2)-C from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR927SOI
released
Annotation file set
: Accessible chromatin annotation for Neural HAc from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR420CEV
released
Annotation file set
: Accessible chromatin annotation for Neural BE(2)-C from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP