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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
Annotation Category
3
Target gene links
1
cis-regulatory elements
Annotation type Category
4
DNase-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
1
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
55
HeLa-S3
40
H1-hESC
24
K562
20
A549
19
HFFc6
10
pituitary stalk
9
EndoC_BH1
9
GM12878
8
H9
7
MCF-7
7
lymphocyte
5
HUES8
5
HepG2
4
CyT49
4
iPSC derived cell line
3
GM18507
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
U937
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
2
22Rv1
2
A172
2
A673
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM19238
2
GM19239
2
GM23248
2
H4
2
HCT-116 cell
2
HEK293
2
HL-60
2
HUES6
2
HuH-7
2
KBM-7
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
LNCAP
2
LNCaP clone FGC
2
M059J
2
MCF 10A cell
2
MDA-MB-231 cell
2
MG63
2
NCCIT cell
2
NCI-H226 cell
2
NT2-D1 cell
2
PC-3
2
Panc1
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
Rh-4 cell
2
SJCRH30
2
SJSA1
2
SK-N-MC
2
SW480
2
T47D
2
THP-1
2
WERI-Rb-1
2
fibroblast cell line
2
fibroblast of cardiac tissue
2
iPS DF 19.11
2
macrophage
1
786-O cell
1
8988T
1
A-673 cell
ACC112
1
AG08395 cell
1
AG20443
1
B-lymphoblastoid cell line
1
C4-2B
1
COLO-829 cell
1
COLO205
1
COLO829
1
CWRU1
1
D341 Med cell
1
DG-75 cell
1
DND-41
1
DOHH2
1
ECC-1
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G-401 cell
1
G401
1
GM08714
1
GM12875
1
GM12891
1
GM12892
1
GM13976
1
GM13977
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM20000
1
GM23338
1
GP5d
1
H54
1
HAC cell
1
HBMEC cell
1
HEK293T
1
HGF
1
HK-2 cell
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES64
1
HeLa cell
1
Hodgkin lymphoma cell line
1
HuH-7.5
1
HuTu-80 cell
1
KMS-11
1
KOPT-K1
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
Loucy
1
MCF10A-Er-Src cell
1
MOLM-13 cell
1
Myoblasts
1
NB-4 cell
1
NB4
1
NCI-H460 cell
1
NCI-H929
1
NHBE cell
1
NHDF cell
1
NHEK
1
Normal Human Astrocytes
1
OCI-AML3
1
OCI-LY1
1
OCI-LY3
1
PA-TU-8988T cell
1
PANC-1 cell
1
REH cell
1
RKO
1
RS4-11 cell
1
RWPE2
1
Rh-5 cell
1
Rhabdomyosarcoma
1
SAEC
1
SGBS preadipocytes
1
SK-CO-1
1
SK-MEL-5
1
SK-N-SH_RA
1
SKH1-Hr hr
1
SKMC
1
SU-DHL-6
1
SUDHL5
1
SW1116
1
Saos-2 cell
1
T-47D cell
1
T84
1
U-266 cell
Organ
1
embryo
Life stage
1
embryonic
Date released
2
May, 2021
1
June, 2020
1
September, 2022
Software used
2
abc
1
macs
1
r
Lab
2
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
biosample_term_name!
ACC112
Showing 4 of 4 results
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Download
FileSet
DSR524BXR
released
Annotation file set
: Target gene predictions for BSS00717 HUES64 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096TII
released
Annotation file set
: enhancer-gene predicton of U937_LPS_4hr-Engreitz from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR010MEO
released
Annotation file set
: enhancer-gene predicton of U937-Engreitz from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR946YTQ
released
Annotation file set
: Accessible chromatin annotation for Blood U-937 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP