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Schema
Citing CMDGA
Clear Filters
Annotation type
16
gene expression
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
24
kidney
20
fibroblast
20
pericyte cell
12
adipocyte
11
renal pelvis
11
right kidney
10
adipose tissue
10
renal cortex interstitium
9
left kidney
8
fibroblast of cardiac tissue
7
mesenchymal stem cell
7
osteoblast
6
skin fibroblast
5
chondrocyte
5
pancreatic stellate cell
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
kidney tubule cell
4
omental fat pad
3
cardiac fibroblast
3
glomerular endothelial cell
3
kidney glomerular epithelial cell
3
left renal cortex interstitium
3
left renal pelvis
3
renal cortical epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
2
ACHN
Caki2
2
GM23248
2
HEK293
2
RCC 7860
2
brain pericyte
2
epithelial cell of proximal tubule
2
extracellular matrix secreting cell
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
luteal cell
2
mesangial cell
2
renal cell carcinoma
2
stromal cell
2
subcutaneous adipose tissue
1
G401
1
HEK293T
1
HT1080
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
adult endothelial progenitor cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
beige adipocyte
1
cortex of kidney
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of the aortic adventitia
1
glomerular epithelium
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
metanephros
1
parietal epithelial cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
stromal cell of bone marrow
1
ureteric bud
1
white adipose cell
1
white adipose tissue
Organ
2
epithelium
2
kidney
0
connective tissue
Life stage
1
unknown
Date released
1
January, 2020
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
Caki2
Showing 2 of 2 results
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Download
FileSet
DSR412AJP
released
Annotation file set
: Target gene predictions for BSS00310 epithelial cell of proximal tubule from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR184YBQ
released
Annotation file set
: Accessible chromatin annotation of kidney epithelial cell of proximal tubule from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP