Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
1
candidate regulatory elements
1
chromatin state
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
snATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
7
MCF-7
6
mammary gland epithelial cell
5
luminal epithelial cell of mammary gland
2
T47D
2
fibroblast of mammary gland
2
mammary epithelial cell
2
myoepithelial cell of mammary gland
Organ
5
epithelium
5
mammary gland
Life stage
1
adult
Date released
4
November, 2021
1
September, 2022
Software used
2
abc
2
macs
1
r
Lab
4
Bing Ren, UCSD
1
AMP-T2D consortium
Project
4
ENCODE
1
AMP
RFA
4
ENCODE3
1
AMP
biosample_type!
tissue
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR679CBG
released
Annotation file set
: Target gene predictions for BSS01185 luminal epithelial cell of mammary gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154LWM
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114GRY
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR221MTY
released
Annotation file set
: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR245LTB
released
Annotation file set
: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE