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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
target gene predictions
2
chromatin state
1
accessible chromatin
1
binding sites
Annotation Category
3
Target gene links
1
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
4
tissue
2
primary cell
1
stem cell
Biosample term
26
retina
25
heart
24
kidney
24
stomach
20
pigmented layer of retina
18
adrenal gland
18
brain
18
small intestine
17
lung
17
muscle of arm
16
muscle of leg
16
placenta
15
large intestine
15
thymus
14
liver
13
left lung
13
muscle of back
12
right lung
11
renal pelvis
11
right kidney
10
adipose tissue
10
heart left ventricle
10
pancreas
10
renal cortex interstitium
10
spleen
9
left kidney
9
psoas muscle
9
spinal cord
8
sigmoid colon
7
islet of Langerhans
7
ovary
6
coronary artery
6
gastrocnemius medialis
6
heart right ventricle
6
thyroid gland
6
tibial nerve
6
transverse colon
5
body of pancreas
5
caudate nucleus
5
muscle of trunk
5
right atrium auricular region
5
tibial artery
4
Ammon's horn
4
Peyer's patch
4
aorta
4
breast epithelium
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
frontal cortex
omental fat pad
4
testis
4
trophoblast
4
upper lobe of left lung
3
ascending aorta
3
cerebellum
3
esophagus
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
midbrain
3
occipital lobe
3
pons
3
prostate gland
3
putamen
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
superior temporal gyrus
3
thoracic aorta
3
tongue
3
urinary bladder
3
uterus
2
Brodmann (1909) area 46
2
angular gyrus
2
cerebellar cortex
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
embryonic facial prominence
2
inferior parietal cortex
2
left cardiac atrium
2
lower leg skin
2
middle frontal gyrus
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
pancreatic ductal cell
2
pancreatic stellate cell
2
parathyroid adenoma
2
right cardiac atrium
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
substantia nigra
2
temporal lobe
2
umbilical cord
2
vagina
1
hindlimb muscle
1
Schwann cell
1
amnion
1
arm bone
1
beige adipocyte
1
bladder (urinary bladder)
1
cardiac ventricle
1
cortex of kidney
1
crypt of Lieberkuhn
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsolateral prefrontal cortex
1
endothelial cell
1
femur
1
fetal heart
1
forelimb muscle
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
glomerular epithelium
1
leg bone
1
mucosa of stomach
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
prefrontal cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
rectum smooth muscle tissue
1
renal cortex tubule
1
right lobe of liver
1
skin of body
1
tissue-resident macrophage
1
type B pancreatic cell
1
white adipose tissue
Organ
4
embryo
Life stage
2
embryonic
Date released
2
September, 2022
1
June, 2020
1
March, 2020
Software used
2
r
1
macs
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
omental fat pad
Showing 4 of 4 results
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Download
FileSet
DSR910MPH
released
Annotation file set
: Target gene predictions for BSS01860 trophoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988IGP
released
Annotation file set
: Target gene predictions for BSS01859 trophoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486IQM
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived trophoblast cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR181ORU
released
Annotation file set
: A target gene prediction annotation in Human Trophoblast of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP