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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
3
DNase-seq
1
ATAC-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
55
HeLa-S3
40
H1-hESC
26
retina
24
K562
24
heart
24
kidney
24
stomach
23
endothelial cell
21
monocyte
20
A549
20
fibroblast
20
pericyte cell
20
pigmented layer of retina
19
CD14-positive monocyte
19
HFFc6
18
B cell
18
brain
17
adrenal gland
17
macrophage
17
muscle of arm
17
small intestine
16
lung
16
muscle of leg
16
placenta
16
smooth muscle cell
15
large intestine
14
common myeloid progenitor, CD34-positive
14
neural progenitor cell
14
thymus
13
excitatory neuron
13
left lung
13
muscle of back
12
adipocyte
12
astrocyte
12
hepatocyte
12
liver
12
right lung
11
T cell
11
hematopoietic multipotent progenitor cell
11
pancreatic beta cell
11
pancreatic ductal cell
11
renal pelvis
11
right kidney
10
CD8-positive, alpha-beta T cell
10
pancreatic acinar cell
10
pancreatic alpha cell
10
pituitary stalk
10
renal cortex interstitium
10
retinal pigment epithelial cell
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
GM12878
9
adipose tissue
9
left kidney
9
natural killer cell
9
pancreatic delta cell
9
regulatory T cell
9
spleen
8
EndoC_BH1
8
H9
8
fibroblast of cardiac tissue
8
glutamatergic neuron
8
heart left ventricle
8
islet of Langerhans
8
pancreas
8
trophoblast cell
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
colon epithelial cell
7
erythroblast
7
keratinocyte
7
lymphocyte
7
osteoblast
7
sigmoid colon
7
skeletal muscle satellite cell
6
SGBS preadipocytes
6
T-helper 1 cell
6
coronary artery
6
dendritic cell
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
gastrocnemius medialis
6
mammary gland epithelial cell
6
memory B cell
6
mesenchymal stem cell
6
mononuclear cell
6
olfactory receptor cell
6
ovary
6
psoas muscle
6
skin fibroblast
6
thyroid gland
6
tibial nerve
6
transverse colon
6
type II pneumocyte
5
HUES8
5
T-helper 17 cell
5
T-helper 2 cell
5
body of pancreas
5
caudate nucleus
5
chondrocyte
5
cortical cell of adrenal gland
5
endothelial cell of umbilical vein
5
foreskin keratinocyte
5
gabaergic neuron
5
inhibitory neuron
5
luminal epithelial cell of mammary gland
5
muscle of trunk
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreatic stellate cell
5
right atrium auricular region
5
skeletal muscle fiber
5
skeletal muscle myoblast
5
tibial artery
4
CD4-positive helper T cell
4
CD4-positive, alpha-beta T cell
4
CyT49
4
HepG2
4
Peyer's patch
4
blood vessel smooth muscle cell
4
breast epithelium
4
cardiac muscle cell
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
frontal cortex
4
glomerular visceral epithelial cell
4
heart right ventricle
4
hepatic stellate cell
4
iPSC derived cell line
4
kidney tubule cell
4
megakaryocyte
4
omental fat pad
4
pancreatic A cell
4
smooth muscle cell of the esophagus
4
testis
4
type B pancreatic cell
4
type I muscle cell
4
type I pneumocyte
4
type II muscle cell
4
upper lobe of left lung
3
cardiac fibroblast
3
Ammon's horn
3
GM18507
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
U937
3
activated CD4-positive, alpha-beta T cell
3
ascending aorta
3
basal cell
3
bipolar neuron
3
bronchial epithelial cell
3
cerebellum
3
choroid plexus epithelial cell
3
ciliated cell
3
club cell
3
endocardial cell
3
endometrium adenocarcinoma
3
enteric neuron
3
enterocyte
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
mesendoderm
3
mesothelial cell
3
midbrain
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neuron
3
neurosphere
3
neutrophil
3
occipital lobe
Life stage
1
embryonic
Date released
1
June, 2020
March, 2020
1
May, 2021
1
September, 2022
Software used
1
abc
1
macs
1
r
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
biosample_term_name!
embryonic stem cell
month_released!
March, 2020
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR401CTI
released
Annotation file set
: Target gene predictions for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR932LQZ
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Mesendoderm_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR746BZC
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived mesendodermal cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP